Dear all, Is there a tool that fills a contour (drawn by me) in the current slice? this will help to segment difficult areas manually in a simple way. Have a nice evening! Ibraheem

Hi Braheem, Check the ‘draw’ tool in the Segment Editor. Use the mouse buttons: left button to draw and right button clic to close the contour. Is that what you’re looking for ?

Thanks a lot, that is exactly what I am looking for :).

If there are actual edges (intensity differences) then you don’t want to segment slice-by-slice. In that case use the Grow from seeds effect. It allows you to just approximately segment on a couple of slices and you automatically get a full 3D segmentation. You can always make adjustments (by adding…

Thanks for the suggestion. The edges are clear to see but not to segment automatically that is why I am using the manual segmentation.

Manual Segmentation, Filling a closed contour in the current slice

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Manual Segmentation, Filling a closed contour in the current slice

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