# Community

**URL:** https://discourse.slicer.org/c/community/12.md?no_subcategories=false&page=37

[Latest](https://discourse.slicer.org/latest.md) · [Categories](https://discourse.slicer.org/categories.md) · [Tags](https://discourse.slicer.org/tags.md)

**Page:** 38

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## [2020.09.21 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-09-21-hangout-w-project-week-discussion/13594)

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**Author:** [@jcfr](https://discourse.slicer.org/u/jcfr)\
**Replies:** 6\
**Last updated:** [September 28, 2020, 6:24pm UTC](https://discourse.slicer.org/t/2020-09-21-hangout-w-project-week-discussion/13594 "2020-09-28T18:24:58Z")

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Tomorrow, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Slicer 5 + …

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## [2020.09.29 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-09-29-hangout-w-project-week-discussion/13737)

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**Author:** [@jcfr](https://discourse.slicer.org/u/jcfr)\
**Replies:** 0\
**Last updated:** [September 28, 2020, 5:13pm UTC](https://discourse.slicer.org/t/2020-09-29-hangout-w-project-week-discussion/13737 "2020-09-28T17:13:31Z")

</div>

Tomorrow, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Slicer 5, Sl…

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## [2020.09.15 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-09-15-hangout-w-project-week-discussion/13486)

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**Author:** [@Sam\_Horvath](https://discourse.slicer.org/u/Sam_Horvath)\
**Replies:** 0\
**Last updated:** [September 15, 2020, 3:12am UTC](https://discourse.slicer.org/t/2020-09-15-hangout-w-project-week-discussion/13486 "2020-09-15T03:12:05Z")

</div>

Tomorrow, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Slicer 5 + …

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## [No b0! Error with the brain masking process](https://discourse.slicer.org/t/no-b0-error-with-the-brain-masking-process/13448)

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**Author:** [@Nicholas.jacobson](https://discourse.slicer.org/u/Nicholas.jacobson)\
**Replies:** 3\
**Last updated:** [September 14, 2020, 3:57pm UTC](https://discourse.slicer.org/t/no-b0-error-with-the-brain-masking-process/13448 "2020-09-14T15:57:51Z")

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Hello, We are starting to research Tractragraphy for 3d printing purposes and struggling to get the process started with our images. We have loaded all of our dwi images but run into a problem with the brain masking pro…

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## [GLSZM feature map in 3D Slicer](https://discourse.slicer.org/t/glszm-feature-map-in-3d-slicer/13463)

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**Author:** [@Matt5](https://discourse.slicer.org/u/Matt5)\
**Replies:** 2\
**Last updated:** [September 13, 2020, 2:44am UTC](https://discourse.slicer.org/t/glszm-feature-map-in-3d-slicer/13463 "2020-09-13T02:44:29Z")

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Operating system: Windows 10 Slicer version: 4.10.2 Is there a GLSZM feature map tool available in 3D Slicer?

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## [2020.09.08 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-09-08-hangout-w-project-week-discussion/13384)

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**Author:** [@Sam\_Horvath](https://discourse.slicer.org/u/Sam_Horvath)\
**Replies:** 0\
**Last updated:** [September 8, 2020, 2:02am UTC](https://discourse.slicer.org/t/2020-09-08-hangout-w-project-week-discussion/13384 "2020-09-08T02:02:04Z")

</div>

Tomorrow, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Slicer 5 Ch…

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## [2020.09.01 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-09-01-hangout-w-project-week-discussion/13270)

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**Author:** [@Sam\_Horvath](https://discourse.slicer.org/u/Sam_Horvath)\
**Replies:** 0\
**Last updated:** [September 1, 2020, 1:22am UTC](https://discourse.slicer.org/t/2020-09-01-hangout-w-project-week-discussion/13270 "2020-09-01T01:22:07Z")

</div>

Tomorrow, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Slicer 5 ch…

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## [FreeSurfer data import not showing segments](https://discourse.slicer.org/t/freesurfer-data-import-not-showing-segments/13258)

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**Author:** [@averyw](https://discourse.slicer.org/u/averyw)\
**Replies:** 0\
**Last updated:** [August 31, 2020, 4:21pm UTC](https://discourse.slicer.org/t/freesurfer-data-import-not-showing-segments/13258 "2020-08-31T16:21:20Z")

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I am running SlicerSALT 3.0 on my Macbook and using the FreeSurfer data import. When I choose the directories in Data Importer, all subjects show up but nothing shows up in the segments table. I downloaded SlicerSALT 2.1…

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## [SlicerSalt Data CSV Import Not Working](https://discourse.slicer.org/t/slicersalt-data-csv-import-not-working/13252)

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**Author:** [@Violet\_Evans](https://discourse.slicer.org/u/Violet_Evans)\
**Replies:** 3\
**Last updated:** [August 31, 2020, 3:49pm UTC](https://discourse.slicer.org/t/slicersalt-data-csv-import-not-working/13252 "2020-08-31T15:49:38Z")

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My Mac SlicerSalt CSV Import button is not letting me type into the text box and no dialogue box appears when the CSV button is clicked.

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## [What was the mother wavelet function used for computing the wavelet features by SlicerRadiomic?](https://discourse.slicer.org/t/what-was-the-mother-wavelet-function-used-for-computing-the-wavelet-features-by-slicerradiomic/13071)

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**Author:** [@danceward](https://discourse.slicer.org/u/danceward)\
**Replies:** 1\
**Last updated:** [August 28, 2020, 2:19am UTC](https://discourse.slicer.org/t/what-was-the-mother-wavelet-function-used-for-computing-the-wavelet-features-by-slicerradiomic/13071 "2020-08-28T02:19:16Z")

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Hello, I am doing some work about radiomic feature extraction from chest CT by SlicerRadiomic, and I want to know what was the mother wavelet function used for computing the wavelet features? Thanks!

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## [How can I install the Chest\_Imaging\_Platform extension into Slicer Nightly Releases manually?](https://discourse.slicer.org/t/how-can-i-install-the-chest-imaging-platform-extension-into-slicer-nightly-releases-manually/3268)

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**Author:** [@huzi\_pf](https://discourse.slicer.org/u/huzi_pf)\
**Replies:** 12\
**Last updated:** [August 25, 2020, 8:52pm UTC](https://discourse.slicer.org/t/how-can-i-install-the-chest-imaging-platform-extension-into-slicer-nightly-releases-manually/3268 "2020-08-25T20:52:10Z")

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Hello, I am new to Chest Imaging Platform and 3d slicer. I tried to intall CPI into Slicer Nightly Releases manually， But I couldn’t achieve it. May you help achieve it ,thanks you very much! 发送自 Windows 10 版邮件应用

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## [2020.08.25 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-08-25-hangout-w-project-week-discussion/13149)

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**Author:** [@Sam\_Horvath](https://discourse.slicer.org/u/Sam_Horvath)\
**Replies:** 1\
**Last updated:** [August 25, 2020, 12:21pm UTC](https://discourse.slicer.org/t/2020-08-25-hangout-w-project-week-discussion/13149 "2020-08-25T12:21:12Z")

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Tomorrow, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Discuss Sli…

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## [Problem with the Interactive lobe segmentation module in the CIP](https://discourse.slicer.org/t/problem-with-the-interactive-lobe-segmentation-module-in-the-cip/6486)

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**Author:** [@mehdi\_T](https://discourse.slicer.org/u/mehdi_T)\
**Replies:** 1\
**Last updated:** [August 20, 2020, 12:41pm UTC](https://discourse.slicer.org/t/problem-with-the-interactive-lobe-segmentation-module-in-the-cip/6486 "2020-08-20T12:41:55Z")

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Hey there, I used the interactive lobe segmentation module on my CT dataset following the instructions of the tutorial, but it didn’t work. The result looks like the fissures fiducials weren’t used in the process of se…

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## [Incomplete options in SlicerCIP (SlicerCIP4-10-2) on Windows (Windows 7 Enterprise, Service Pack 1) and Linux (Ubuntu 18.04.4 LTS)](https://discourse.slicer.org/t/incomplete-options-in-slicercip-slicercip4-10-2-on-windows-windows-7-enterprise-service-pack-1-and-linux-ubuntu-18-04-4-lts/13067)

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**Author:** [@shahrokh](https://discourse.slicer.org/u/shahrokh)\
**Replies:** 4\
**Last updated:** [August 19, 2020, 5:10am UTC](https://discourse.slicer.org/t/incomplete-options-in-slicercip-slicercip4-10-2-on-windows-windows-7-enterprise-service-pack-1-and-linux-ubuntu-18-04-4-lts/13067 "2020-08-19T05:10:56Z")

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Hello Dear Developers and Users As mentioned on the sixth page of this file in Interactive Lobe segmentation, when filtering is ”on” I expect to open a new frame opens for selecting filter type (NLM, Median and Gaussian…

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## [2020.08.18 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-08-18-hangout-w-project-week-discussion/13009)

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**Author:** [@Sam\_Horvath](https://discourse.slicer.org/u/Sam_Horvath)\
**Replies:** 1\
**Last updated:** [August 18, 2020, 1:57pm UTC](https://discourse.slicer.org/t/2020-08-18-hangout-w-project-week-discussion/13009 "2020-08-18T13:57:16Z")

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Tuesday, we will be having our next weekly hangout at 10:00 AM ET until 11 AM ET. Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Slicer 5 pro…

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## [Paleontology videos about software tools including slicer](https://discourse.slicer.org/t/paleontology-videos-about-software-tools-including-slicer/13053)

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**Author:** [@pieper](https://discourse.slicer.org/u/pieper)\
**Replies:** 0\
**Last updated:** [August 17, 2020, 7:13pm UTC](https://discourse.slicer.org/t/paleontology-videos-about-software-tools-including-slicer/13053 "2020-08-17T19:13:31Z")

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Here’s a nice set of training videos about paleontology-related 3D data: https://www.youtube.com/channel/UCJaiHFrVy0wdObYoV-rwXPw

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## [How to segment lung lobe automatically?](https://discourse.slicer.org/t/how-to-segment-lung-lobe-automatically/13036)

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**Author:** [@Alice](https://discourse.slicer.org/u/Alice)\
**Replies:** 0\
**Last updated:** [August 17, 2020, 8:02am UTC](https://discourse.slicer.org/t/how-to-segment-lung-lobe-automatically/13036 "2020-08-17T08:02:54Z")

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I need to computue the related data of lung lobe, like the volume of each lobe. I have known that the module “Interactive lobe segmentation” in “Chest Imaging Platform (CIP)” can segment the lung lobe, but it isn’t auto…

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## [Compute the related data of lung airway by VMTK](https://discourse.slicer.org/t/compute-the-related-data-of-lung-airway-by-vmtk/13032)

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**Author:** [@Alice](https://discourse.slicer.org/u/Alice)\
**Replies:** 0\
**Last updated:** [August 17, 2020, 3:47am UTC](https://discourse.slicer.org/t/compute-the-related-data-of-lung-airway-by-vmtk/13032 "2020-08-17T03:47:21Z")

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When I used the module VMTK to compute the data of lung airway,I found the option “Non-manifold edges” instead of the option “Curve tree root”.Maybe that’s because I used the version 4.10.2,and you used the version 4.11.…

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## [Consistent ordering of surface points on meshes generated by SPHARM-PDM](https://discourse.slicer.org/t/consistent-ordering-of-surface-points-on-meshes-generated-by-spharm-pdm/12955)

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**Author:** [@Zhiy](https://discourse.slicer.org/u/Zhiy)\
**Replies:** 2\
**Last updated:** [August 16, 2020, 7:56pm UTC](https://discourse.slicer.org/t/consistent-ordering-of-surface-points-on-meshes-generated-by-spharm-pdm/12955 "2020-08-16T19:56:09Z")

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Hi, I am using SPHARM-PDM downloaded from spharm-pdm\_v1.13\_linux64.zip. My inputs are binary image files (\*.nrrd). My expectation is that SPHARM-PDM can output triangle meshes that have a consistent ordering on the sur…

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## [Temporal Bone Segmentation](https://discourse.slicer.org/t/temporal-bone-segmentation/13023)

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**Author:** [@Georgescu\_George](https://discourse.slicer.org/u/Georgescu_George)\
**Replies:** 0\
**Last updated:** [August 16, 2020, 2:31pm UTC](https://discourse.slicer.org/t/temporal-bone-segmentation/13023 "2020-08-16T14:31:53Z")

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What is the best method for segmenting the temporal bone from a CT for 3D printing? I’m having a lot of trouble with the mastoid air cells, there’s always a hole in the pietrous part of the temporal all the way through …

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## [Converting multi channel mask or colored mask to colored DICO Mask](https://discourse.slicer.org/t/converting-multi-channel-mask-or-colored-mask-to-colored-dico-mask/12952)

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**Author:** [@Nawaf\_Khan](https://discourse.slicer.org/u/Nawaf_Khan)\
**Replies:** 0\
**Last updated:** [August 11, 2020, 10:22pm UTC](https://discourse.slicer.org/t/converting-multi-channel-mask-or-colored-mask-to-colored-dico-mask/12952 "2020-08-11T22:22:28Z")

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I have question I Have DATA which I segmented on the slicer and its segmentation mask color is pink yellow and green I want to export all these segmentation masks with these color as Dicom any idea will be helpful thanks …

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## [2D Shape features for multiple ROIs in single image](https://discourse.slicer.org/t/2d-shape-features-for-multiple-rois-in-single-image/12911)

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**Author:** [@kalyani7195](https://discourse.slicer.org/u/kalyani7195)\
**Replies:** 2\
**Last updated:** [August 10, 2020, 5:15am UTC](https://discourse.slicer.org/t/2d-shape-features-for-multiple-rois-in-single-image/12911 "2020-08-10T05:15:09Z")

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Hello Pyradiomics team, I am currently working on Mammograms from INBreast dataset and each mammogram has multiple calcifications. The mask is white(65535) for ROIs i.e. calcifications and black for the rest of the area…

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## [2020.08.11 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-08-11-hangout-w-project-week-discussion/12881)

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**Author:** [@jcfr](https://discourse.slicer.org/u/jcfr)\
**Replies:** 0\
**Last updated:** [August 6, 2020, 10:52pm UTC](https://discourse.slicer.org/t/2020-08-11-hangout-w-project-week-discussion/12881 "2020-08-06T22:52:59Z")

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We will be having our next weekly hangout at 10:00 AM ET until 11 AM ET on 2020.08.11 Anyone is welcome to join to ask questions at https://bit.ly/slicer-googlemeet-hosted-by-kitware Agenda (10:00 - 10:30): Updated …

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## [Chest Imaging Platform](https://discourse.slicer.org/t/chest-imaging-platform/12826)

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**Author:** [@Alice](https://discourse.slicer.org/u/Alice)\
**Replies:** 2\
**Last updated:** [August 6, 2020, 6:26pm UTC](https://discourse.slicer.org/t/chest-imaging-platform/12826 "2020-08-06T18:26:04Z")

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I installed the newest 3D Slicer 4.10.2 including Chest Imaging Platform,but I failed to run the software fallowing the PDF on Chest Imaging Platform’s web.

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## [2020.08.04 Hangout w/ Project Week Discussion](https://discourse.slicer.org/t/2020-08-04-hangout-w-project-week-discussion/12832)

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**Author:** [@Sam\_Horvath](https://discourse.slicer.org/u/Sam_Horvath)\
**Replies:** 2\
**Last updated:** [August 4, 2020, 4:06pm UTC](https://discourse.slicer.org/t/2020-08-04-hangout-w-project-week-discussion/12832 "2020-08-04T16:06:51Z")

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Hi all: We will be having the developer hangout tomorrow at 10:00 AM EST until 11 AM EST. We will be brainstorming ideas for what a fully virtual January project week could look like. Anyone is welcome to join to ask …

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## [Airway segmentation](https://discourse.slicer.org/t/airway-segmentation/8940)

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**Author:** [@Kedar\_Hibare](https://discourse.slicer.org/u/Kedar_Hibare)\
**Replies:** 4\
**Last updated:** [August 3, 2020, 8:19am UTC](https://discourse.slicer.org/t/airway-segmentation/8940 "2020-08-03T08:19:58Z")

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Hi, I am new to 3D slicer and I am learning by trial and error airway segmentation so that I can design airway prosthesis (airway stents). I wish to 3D print the same after doing so. I haven’t been able to master it with…

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## [PET normalisation before Radiomics](https://discourse.slicer.org/t/pet-normalisation-before-radiomics/12765)

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**Author:** [@Nora](https://discourse.slicer.org/u/Nora)\
**Replies:** 1\
**Last updated:** [July 31, 2020, 4:48am UTC](https://discourse.slicer.org/t/pet-normalisation-before-radiomics/12765 "2020-07-31T04:48:39Z")

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Hello All, I’ve been trying to calculate the bin width for fixed bin numbers. However, some PET data range were fluctuating. Example the minimum SUV = 3274.76, and the maximum = 14063.3. I looked to pyradiomics recomme…

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## [Slicer Radiomics](https://discourse.slicer.org/t/slicer-radiomics/12791)

<div class="topic-metadata">

**Author:** [@mcastro](https://discourse.slicer.org/u/mcastro)\
**Replies:** 2\
**Last updated:** [July 31, 2020, 4:43am UTC](https://discourse.slicer.org/t/slicer-radiomics/12791 "2020-07-31T04:43:01Z")

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Operating system: Windiows Slicer version: 4.10.2 Expected behavior: Actual behavior: I am using Slicer Radiomics with a parameter file. The possible settings depends on the PyRadiomics version used within Slicer Rad…

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## [Partial correlation](https://discourse.slicer.org/t/partial-correlation/12394)

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**Author:** [@quentin\_devignes](https://discourse.slicer.org/u/quentin_devignes)\
**Replies:** 4\
**Last updated:** [July 29, 2020, 3:17pm UTC](https://discourse.slicer.org/t/partial-correlation/12394 "2020-07-29T15:17:33Z")

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Hello SlicerSALT Team, As far as partial correlation can not be done with shapeAnalysisMANCOVA, do you know I could perform it? I thought I could use the distance at each vertex between my patients’ shapes and the mean …

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## [cannot import name 'featureextractor' from 'radiomics'](https://discourse.slicer.org/t/cannot-import-name-featureextractor-from-radiomics/12768)

<div class="topic-metadata">

**Author:** [@hanna](https://discourse.slicer.org/u/hanna)\
**Replies:** 1\
**Last updated:** [July 29, 2020, 1:19pm UTC](https://discourse.slicer.org/t/cannot-import-name-featureextractor-from-radiomics/12768 "2020-07-29T13:19:34Z")

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I have installed the python 3.7 and the radiomics. when I ran the .py file there is an error"cannot import name ‘featureextractor’ from ‘radiomics’ ". What can I do to resolve the problem?

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