Hi all, I am looking to automate the vmtkcenterlines function in order to be able to run it on a server. It seems that my option is to have open profiles and use seed selector. This causes an issue because I need the entire processing to be automated, to open the profiles I would need to utilize som…

You can have a look how it got fully automated in 3D Slicer’s Extract Centerline module. See source code here .

Automatation of Centerline

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