You can maybe try FreeSurfer directly, or if it’s not working you can use SynthSeg and run the results through FreeSurfer. You can work with the results in Slicer.
Related topics
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| Brain Tissues Extension not found/Separating Brain Tissues | 0 | 194 | January 9, 2021 | |
| Segmenting out a brain in an MRI | 6 | 6048 | May 16, 2024 | |
| Automated brain segmentation into White Matter Volume, GMV, and CSF Vol? | 6 | 1821 | August 27, 2021 | |
| existing module for segmenting grey matter | 1 | 316 | July 19, 2023 | |
| SlicerBS for brain image segmentation | 13 | 1394 | August 18, 2023 |