Under Ubuntu 20.04, sitkUtils.PullVolumeFromSlicer() works fine in Slicer 5.0.3. In 5.2.1 and later, the call consistently raises an error: File "/bin/slicer5.2.1/Slicer-5.2.1-linux-amd64/bin/Python/sitkUtils.py", line 36, in PullVolumeFromSlicer sitkimage = sitk.ReadImage(myNodeFullITKAddres…

SimpleITK works in Slicer with a customized version. I would be suspicious if any of your additional python packages uninstalled/installed a different version of SimpleITK.

Did sitkUtils.PullVolumeFromSlicer() break with Slicer 5.2?

Development

jamesobutler (James Butler) December 21, 2022, 1:48am 5

Xref the following error which happened upon installing a python package that installed another version of SimpleITK rather than keeping the Slicer customized version.

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Did sitkUtils.PullVolumeFromSlicer() break with Slicer 5.2?

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