# diffusion reader

**URL:** https://discourse.slicer.org/t/diffusion-reader/4758
**Category:** Support
**Created:** [November 14, 2018, 2:27pm UTC](https://discourse.slicer.org/t/diffusion-reader/4758 "2018-11-14T14:27:27Z")
**Posts on this page:** 7
**Page:** 1

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### Author: ![JiDafeng](https://avatars.discourse-cdn.com/v4/letter/j/ce73a5/32.png) [@JiDafeng](https://discourse.slicer.org/u/JiDafeng)
#### Post date: [November 14, 2018, 2:27pm UTC](https://discourse.slicer.org/t/diffusion-reader/4758/1 "2018-11-14T14:27:27Z")

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Operating system:WINDOS7  
Slicer version:4.8.1  
Expected behavior:diffusion volume reader  
Actual behavior:only scalar volume reader  
I want to load DWI or DTI series on the slicer and turn the series files into nrrd files, but there’s only scalar reader which could not load the DWI or DTI correctly.

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### Author: ![pieper](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/pieper/32/8_2.png) [@pieper](https://discourse.slicer.org/u/pieper)
#### Post date: [November 14, 2018, 2:42pm UTC](https://discourse.slicer.org/t/diffusion-reader/4758/2 "2018-11-14T14:42:58Z")

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> [@JiDafeng](#):
>
> I want to load DWI or DTI series on the slicer and turn the series files into nrrd files, but there’s only scalar reader which could not load the DWI or DTI correctly.

Unfortunately that’s a complex topic and lots of things can happen.

As a start you can look at the links below to see what other people have done. If you are still stuck usually the best thing to do is share a sample dataset of the type you are trying to convert (scan of a phantom or anonymized data).

[https://discourse.slicer.org/search?q=diffusion%20tags%3Adiffusion](https://discourse.slicer.org/search?q=diffusion%20tags%3Adiffusion)

> **[Documentation](https://dmri.slicer.org/docs/)**
>
> Diffusion MRI in 3D Slicer: open-source software for diffusion magnetic resonance imaging

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### Author: ![fedorov](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/fedorov/32/14_2.png) [@fedorov](https://discourse.slicer.org/u/fedorov)
#### Post date: [November 14, 2018, 8:45pm UTC](https://discourse.slicer.org/t/diffusion-reader/4758/3 "2018-11-14T20:45:37Z")

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Certain types of DWI can be loaded as multivolumes/sequences using MultVolume DICOM plugin. Make sure it is enabled (toggle “Advanced” checkbox in DICOM Browser), and look at all loadable options to see if a multivolume was recognized.

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### Author: ![ljod](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/ljod/32/652_2.png) [@ljod](https://discourse.slicer.org/u/ljod)
#### Post date: [November 14, 2018, 9:50pm UTC](https://discourse.slicer.org/t/diffusion-reader/4758/4 "2018-11-14T21:50:30Z")

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For DTI, make sure you have installed SlicerDMRI.  
[http://dmri.slicer.org/download/](http://dmri.slicer.org/download/)

And try the DWIConverter tutorial here:  
[http://dmri.slicer.org/docs/](http://dmri.slicer.org/docs/)

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### Author: ![JiDafeng](https://avatars.discourse-cdn.com/v4/letter/j/ce73a5/32.png) [@JiDafeng](https://discourse.slicer.org/u/JiDafeng)
#### Post date: [November 15, 2018, 12:52am UTC](https://discourse.slicer.org/t/diffusion-reader/4758/5 "2018-11-15T00:52:59Z")

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Andrey Fedorov:

Thank you for your advice, I would try to find the adaptive tools such as multivolume reader to load the DTI files.

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### Author: ![ljod](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/ljod/32/652_2.png) [@ljod](https://discourse.slicer.org/u/ljod)
#### Post date: [November 15, 2018, 1:22am UTC](https://discourse.slicer.org/t/diffusion-reader/4758/6 "2018-11-15T01:22:02Z")

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To clarify, if this is brain (or other) DTI, you should use the DWIConverter. If it is not a DTI acquisition, then try what Andrey suggests.

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### Author: ![fedorov](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/fedorov/32/14_2.png) [@fedorov](https://discourse.slicer.org/u/fedorov)
#### Post date: [November 15, 2018, 3:03am UTC](https://discourse.slicer.org/t/diffusion-reader/4758/7 "2018-11-15T03:03:12Z")

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I second Lauren’s comment. Multivolume plugin is useless for DTI data.
