# FastSurfer: Problem running with multiple subjects

**URL:** <https://discourse.slicer.org/t/fastsurfer-problem-running-with-multiple-subjects/36759>\
**Category:** Support\
**Tags:** docker\
**Created:** [June 13, 2024, 2:47pm UTC](https://discourse.slicer.org/t/fastsurfer-problem-running-with-multiple-subjects/36759 "2024-06-13T14:47:35Z")\
**Posts on this page:** 2\
**Page:** 1

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**Author:** ![Farah\_N](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/farah_n/32/76953_2.png) [@Farah\_N](https://discourse.slicer.org/u/Farah_N)\
**Post date:** [June 13, 2024, 2:47pm UTC](https://discourse.slicer.org/t/fastsurfer-problem-running-with-multiple-subjects/36759/1 "2024-06-13T14:47:35Z")

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### I am running FastSufer for multiple subjects, but I don’t get it whether the problem is with the ‘–entrypoint’ flag or docker.

```auto
(base) user1nrx@srv-imgrm-04:~/software_research/my_fastsurfer_analysis/DATA$ sudo docker run --gpus all -v /home/user1nrx/software_research/my_fastsurfer_analysis/DATA:/data -v /home/user1nrx/software_research/my_fastsurfer_analysis/OUTPUT:/output -v /home/user1nrx/software_research/my_fastsurfer_analysis/freesurfer_license:/fs_license --entrypoint "/fastsurfer/brun_fastsurfer.sh" --rm --user $(id -u):$(id -g) deepmi/fastsurfer:latest --fs_license /fs_license/license.txt --sd /output --subject_list /data/subjects_list.txt --parallel --3T

```

```auto
INFO: run_fastsurfer not explicitly specified, using $FASTSURFER_HOME/run_fastsurfer.sh.
ERROR: Flag unrecognized.

```

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<div class="post-metadata">

**Author:** ![pieper](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/pieper/32/8_2.png) [@pieper](https://discourse.slicer.org/u/pieper)\
**Post date:** [June 13, 2024, 8:47pm UTC](https://discourse.slicer.org/t/fastsurfer-problem-running-with-multiple-subjects/36759/2 "2024-06-13T20:47:00Z")

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You should probably check with the freesurfer/fastsurfer team for help with this.