# How can i use 3DSlicer in a not local host container to do a brain segmentation of a Photon-Counting CT (totalsegmentor extension)?

**URL:** https://discourse.slicer.org/t/how-can-i-use-3dslicer-in-a-not-local-host-container-to-do-a-brain-segmentation-of-a-photon-counting-ct-totalsegmentor-extension/32785
**Category:** Support
**Created:** [November 13, 2023, 5:50pm UTC](https://discourse.slicer.org/t/how-can-i-use-3dslicer-in-a-not-local-host-container-to-do-a-brain-segmentation-of-a-photon-counting-ct-totalsegmentor-extension/32785 "2023-11-13T17:50:12Z")
**Posts on this page:** 4
**Page:** 1

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### Author: ![Carolina\_Alves](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/carolina_alves/32/68292_2.png) [@Carolina\_Alves](https://discourse.slicer.org/u/Carolina_Alves)
#### Post date: [November 13, 2023, 5:50pm UTC](https://discourse.slicer.org/t/how-can-i-use-3dslicer-in-a-not-local-host-container-to-do-a-brain-segmentation-of-a-photon-counting-ct-totalsegmentor-extension/32785/1 "2023-11-13T17:50:12Z")

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I do not know how to install the 3DSlicer in my not localhost container xc. I pretend to use the total segmentor extension in a jupyter notebook of my container. This is for my master thesis about segmentation a PCCT.

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### Author: ![pieper](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/pieper/32/8_2.png) [@pieper](https://discourse.slicer.org/u/pieper)
#### Post date: [November 13, 2023, 6:18pm UTC](https://discourse.slicer.org/t/how-can-i-use-3dslicer-in-a-not-local-host-container-to-do-a-brain-segmentation-of-a-photon-counting-ct-totalsegmentor-extension/32785/2 "2023-11-13T18:18:38Z")

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> [@Carolina\_Alves](#):
>
> not localhost container xc

Can you clarify what you are refering to here?

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### Author: ![Carolina\_Alves](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/carolina_alves/32/68292_2.png) [@Carolina\_Alves](https://discourse.slicer.org/u/Carolina_Alves)
#### Post date: [November 14, 2023, 9:56am UTC](https://discourse.slicer.org/t/how-can-i-use-3dslicer-in-a-not-local-host-container-to-do-a-brain-segmentation-of-a-photon-counting-ct-totalsegmentor-extension/32785/3 "2023-11-14T09:56:54Z")

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For my thesis project, my advisor has created an online container on his server for me to work on, but I can’t install 3DSlicer xc there (I think it has to be a terminal or script installation).

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### Author: ![pieper](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/pieper/32/8_2.png) [@pieper](https://discourse.slicer.org/u/pieper)
#### Post date: [November 14, 2023, 1:30pm UTC](https://discourse.slicer.org/t/how-can-i-use-3dslicer-in-a-not-local-host-container-to-do-a-brain-segmentation-of-a-photon-counting-ct-totalsegmentor-extension/32785/4 "2023-11-14T13:30:59Z")

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This sounds like something you’ll need to work out with your advisor. Slicer is a desktop application that needs something like a windows desktop or an X session, ideally with GPU support for most operations. You could research how Slicer is used in docker or on cloud virtual machines to better understand what your options are (there’s a lot of material you can get via a search engine query).
