# Questions about projectSemiLM

**URL:** <https://discourse.slicer.org/t/questions-about-projectsemilm/25125>\
**Category:** Support\
**Created:** [September 6, 2022, 3:06pm UTC](https://discourse.slicer.org/t/questions-about-projectsemilm/25125 "2022-09-06T15:06:51Z")\
**Posts on this page:** 5\
**Page:** 1

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**Author:** ![yyl](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/yyl/32/14582_2.png) [@yyl](https://discourse.slicer.org/u/yyl)\
**Post date:** [September 6, 2022, 3:06pm UTC](https://discourse.slicer.org/t/questions-about-projectsemilm/25125/1 "2022-09-06T15:06:51Z")

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Dear all,  
I successfully transferred semilandmarks from the temple to the specimen, but some semilandmarks have no contact with the surface of the model. Some points run inside the model. I tried to change the Projection scale. It does not work. What should I do next?  
Thank you very much!  
Best wishes

 ![image](https://us1.discourse-cdn.com/flex002/uploads/slicer/original/3X/6/d/6d12db30a7624fbc09a437f82ef95862f6bb90b8.jpeg)

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**Author:** ![smrolfe](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/smrolfe/32/3659_2.png) [@smrolfe](https://discourse.slicer.org/u/smrolfe)\
**Post date:** [September 6, 2022, 6:14pm UTC](https://discourse.slicer.org/t/questions-about-projectsemilm/25125/2 "2022-09-06T18:14:20Z")

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The most likely issue would be a very large difference or incorrect mapping between the individual and the template. Would you be able to share the template model and landmarks, plus this model?

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**Author:** ![yyl](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/yyl/32/14582_2.png) [@yyl](https://discourse.slicer.org/u/yyl)\
**Post date:** [September 7, 2022, 1:48am UTC](https://discourse.slicer.org/t/questions-about-projectsemilm/25125/3 "2022-09-07T01:48:58Z")

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I can not upload files here, so I upload them somewhere else.  
These are my template module, specimen module, and landmarks.Thanks!  
[https://www.researchgate.net/post/Questions\_about\_projectSemiLM](https://www.researchgate.net/post/Questions_about_projectSemiLM)

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**Author:** ![smrolfe](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/smrolfe/32/3659_2.png) [@smrolfe](https://discourse.slicer.org/u/smrolfe)\
**Post date:** [September 7, 2022, 4:56pm UTC](https://discourse.slicer.org/t/questions-about-projectsemilm/25125/4 "2022-09-07T16:56:34Z")

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Thanks for sharing these samples. The order of the last two landmarks on the specimen is reversed compared to the template, so the TPS transform is estimated incorrectly. Swapping these two landmarks will correct the issue.

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**Author:** ![yyl](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/yyl/32/14582_2.png) [@yyl](https://discourse.slicer.org/u/yyl)\
**Post date:** [September 8, 2022, 7:59am UTC](https://discourse.slicer.org/t/questions-about-projectsemilm/25125/5 "2022-09-08T07:59:44Z")

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I changed the order of these two landmarks, and it does work! Thank you very much!
