I would like to use a web browser to access the Slicer GUI for a slicer instance running in a docker container. SlicerDocker/slicer-notebook includes a Dockerfile to expose a Jupyter notebook attached to the slicer kernel, and some code related to GUI exposure: VNCPORT in Dockerfile, commented out …

Hi Nadya - Here are some dockerfiles that set up vnc access via x11vnc and noVNC for web browser access: [image] GitHub - pieper/SlicerDockers: docker config files for slicer docker config files for slicer. Contribute to pieper/SlicerDockers development by creating an account on GitHub…

Thanks Steve, will check it out. Nadya

I’ve got the SlicerDockers/slicer container to build (needs a different bitstream code to download Slicer 4.11.20200930 now, and curl -k to skip certificate check). The container runs fine, and shows the X environment in the browser. When I click the Slicer icon, only Slicer splash screen briefly fl…

Sounds like you are close. You are probably running into this issue: [image] Can't start latest stable on ubuntu 20.04 Support Due to the issues we had with Centos 7 and latest stable, I just recently installed Ubuntu 20.04 on a spare machine. This is just a default ins…

Thank you - it works if the following patch is applied to SlicerDockers/Dockerfile at master · pieper/SlicerDockers · GitHub 11d10 < RUN apt-get install -y --reinstall libxcb-xinerama0 12a12,13 > RUN apt-get install -y libxcb-shape0 libxcb-xinerama0 libxcb-xinerama0-dev > RUN apt-get install -y lib…

That’s great Nadya. Would you be willing to put that in the form of a pull request to the repository?

Yes, sure. Please advise which way.

You can make a fork of the repository and apply your changes either directly in the github web page or in a local checkout that you push back to the fork. Then you create a pull request proposing the changes and we can discuss as needed or I’ll just go ahead and merge. I know these are small edits…

Just in case there is anyone else looking for Docker Slicer GUI, I also have one based on Ubuntu Desktop, could not rebuild Steve’s Image [image] GitHub - kchemorion/slicerGUI Contribute to kchemorion/slicerGUI development by creating an account on GitHub. O…

Slicer Docker for GUI via browser

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pieper (Steve Pieper (Isomics, Inc.)) March 17, 2022, 12:44pm 5

Sounds like you are close. You are probably running into this issue:

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Slicer Docker for GUI via browser

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