# Spinal Cord Segmentation

**URL:** https://discourse.slicer.org/t/spinal-cord-segmentation/6100
**Category:** Support
**Tags:** segmentation
**Created:** [March 11, 2019, 5:29am UTC](https://discourse.slicer.org/t/spinal-cord-segmentation/6100 "2019-03-11T05:29:20Z")
**Posts on this page:** 4
**Page:** 1

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### Author: ![dp1991](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/dp1991/32/3142_2.png) [@dp1991](https://discourse.slicer.org/u/dp1991)
#### Post date: [March 11, 2019, 5:29am UTC](https://discourse.slicer.org/t/spinal-cord-segmentation/6100/1 "2019-03-11T05:29:20Z")

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Hi , Have a nice time  
i will segmented spinal cord (or spinal canal )in ct image  
can anyone help me ??  
what is the best algorithm for this purpose??

i will output like as attached image

 ![a%20(1)](https://us1.discourse-cdn.com/flex002/uploads/slicer/original/3X/1/0/10010f82231f3d41641a6266796c534ea24de5f0.jpeg)

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### Author: ![brhoom](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/brhoom/32/1228_2.png) [@brhoom](https://discourse.slicer.org/u/brhoom)
#### Post date: [March 11, 2019, 8:29am UTC](https://discourse.slicer.org/t/spinal-cord-segmentation/6100/2 "2019-03-11T08:29:15Z")

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There is a similar topic [here](https://discourse.slicer.org/t/automated-spinal-cord-segmentation/3161) that may help.

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### Author: ![cpinter](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/cpinter/32/7995_2.png) [@cpinter](https://discourse.slicer.org/u/cpinter)
#### Post date: [March 11, 2019, 2:41pm UTC](https://discourse.slicer.org/t/spinal-cord-segmentation/6100/3 "2019-03-11T14:41:48Z")

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Also

> [@New video tutorial for Segment editor - lumbar spine segmentation for 3D printing](https://discourse.slicer.org/t/new-video-tutorial-for-segment-editor-lumbar-spine-segmentation-for-3d-printing/700):
>
> This is the first part of a video tutorial series that teaches how to use Segment editor. This tutorial explains how to create a 3D-printable lumbar spine segment that can be used for lumbar puncture training: The video tutorial was created by Hilary Lia (PerkLab, Queen’s University), with help from @cpinter, @lassoan, @ungi. Please post your comments here about how useful this tutorial format is, what did you like/what to improve, what topics/techniques/anatomical structures you would be int…

> [@Pig Spinal Vertebrae Segmentation](https://discourse.slicer.org/t/pig-spinal-vertebrae-segmentation/3476):
>
> Operating system: Windows 10 Slicer version: 4.8.1 Hi, I am attempting to segment the spinal vertebrae of a pig from CT images. The objective is to generate a surface model from the bone segmentation. The user will then perform a registration between the model and the pig (matching points on the model to the respective points on the pig’s spine) so that a surgical navigation system is in place. The region of interest is the spinous process (the pointy tip of the vertebra; enclosed in red) s…

When you have a question, please try to perform a search first, there are tons of materials available (for example the link to the topic and video above is also available form the [Training page](https://www.slicer.org/wiki/Documentation/Nightly/Training#Segmentation)).

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### Author: ![dp1991](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/dp1991/32/3142_2.png) [@dp1991](https://discourse.slicer.org/u/dp1991)
#### Post date: [March 12, 2019, 12:44pm UTC](https://discourse.slicer.org/t/spinal-cord-segmentation/6100/4 "2019-03-12T12:44:05Z")

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SCT is for MRI images, my images are CT  
and so  
i need a arithmetic algorithm , no already module …
