# TotalSegmentator Failed to compute results....returned non-zero exit status 1
**URL:** https://discourse.slicer.org/t/totalsegmentator-failed-to-compute-results-returned-non-zero-exit-status-1/38142
**Category:** Support
**Tags:** totalsegmentator
**Created:** [August 31, 2024, 2:13pm UTC](https://discourse.slicer.org/t/totalsegmentator-failed-to-compute-results-returned-non-zero-exit-status-1/38142 "2024-08-31T14:13:27Z")
**Posts on this page:** 1
**Showing post:** 11
### Author:  [@jamesobutler](https://discourse.slicer.org/u/jamesobutler)
#### Post date: [January 16, 2025, 2:04pm UTC](https://discourse.slicer.org/t/totalsegmentator-failed-to-compute-results-returned-non-zero-exit-status-1/38142/11 "2025-01-16T14:04:23Z")
Following up here I issued a PR to the SlicerNNUnet extension which is involved in installing acvl\_utils and fixed the installation issues. So manually calling pip\_install here is no longer needed as long as you have updated your extension to this latest version.
>
>
> This includes several commits from the \[SlicerTotalSegmentator\](https://github.c…om/lassoan/SlicerTotalSegmentator) extension which had workaround fixes associated with installing nnunetv2 and its dependencies. As originally discussed at https://github.com/Slicer/ExtensionsIndex/pull/2016#issuecomment-2004337762, this extension is to serve as a way to centrally maintain the install of nnUNet in Slicer.
>
> This therefore closes https://github.com/KitwareMedical/SlicerNNUnet/issues/10 where an error was observed during install of nnunetv2.
>
>
> \## Testing with SlicerDentalSegmentator
> I have tested this in the context of \[SlicerDentalSegmentator\](https://github.com/gaudot/SlicerDentalSegmentator) where this closes https://github.com/gaudot/SlicerDentalSegmentator/issues/21. I am now able to run DentalSegmentator using the CBCT Dental Surgery sample data set and get successful results where previously I ran into issues during install of python packages. I used a fresh install of Slicer 5.7.0-2024-12-31 with a cleared out system pip cache so that all downloads would be fresh.
> !\[image\](https://github.com/user-attachments/assets/ffc72bd8-cfcf-4962-94c1-5d0538d8c6a5)
>
> \
> \DentalSegmentator python console output click here\
>
> \`\`\`
> Python 3.9.10 (main, Dec 31 2024, 23:19:20) \[MSC v.1939 64 bit (AMD64)\] on win32
> \>\>\>
> \[Qt\] void \_\_cdecl qMRMLSegmentEditorWidget::setSourceVolumeNode(class vtkMRMLNode \*) failed: need to set segment editor and segmentation nodes first
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> Requirement already satisfied: torch in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (2.5.1+cu124)
> Requirement already satisfied: SimpleITK in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (2.4.0rc2.dev213)
> Requirement already satisfied: scikit-image in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (0.24.0)
> Collecting connected-components-3d (from acvl\_utils==0.2)
> Downloading connected\_components\_3d-3.22.0-cp39-cp39-win\_amd64.whl.metadata (32 kB)
> Requirement already satisfied: pillow\>=7.1.2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (10.3.0)
> Requirement already satisfied: scipy in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.13.1)
> Requirement already satisfied: scikit-learn in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.6.0)
> Requirement already satisfied: future in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.0.0)
> Requirement already satisfied: pandas in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (2.2.3)
> Requirement already satisfied: unittest2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.1.0)
> Requirement already satisfied: threadpoolctl in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (3.5.0)
> Requirement already satisfied: networkx\>=2.8 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (3.2.1)
> Requirement already satisfied: imageio\>=2.33 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (2.36.1)
> Requirement already satisfied: tifffile\>=2022.8.12 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (2024.8.30)
> Requirement already satisfied: packaging\>=21 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (24.0)
> Requirement already satisfied: lazy-loader\>=0.4 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (0.4)
> Requirement already satisfied: filelock in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (3.13.1)
> Requirement already satisfied: typing-extensions\>=4.8.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (4.12.1)
> Requirement already satisfied: jinja2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (3.1.5)
> Requirement already satisfied: fsspec in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (2024.2.0)
> Requirement already satisfied: sympy==1.13.1 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (1.13.1)
> Requirement already satisfied: mpmath\<1.4,\>=1.1.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from sympy==1.13.1-\>torch-\>acvl\_utils==0.2) (1.3.0)
> Requirement already satisfied: MarkupSafe\>=2.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from jinja2-\>torch-\>acvl\_utils==0.2) (3.0.2)
> Requirement already satisfied: python-dateutil\>=2.8.2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas-\>batchgenerators-\>acvl\_utils==0.2) (2.9.0.post0)
> Requirement already satisfied: pytz\>=2020.1 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas-\>batchgenerators-\>acvl\_utils==0.2) (2024.2)
> Requirement already satisfied: tzdata\>=2022.7 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas-\>batchgenerators-\>acvl\_utils==0.2) (2024.2)
> Requirement already satisfied: joblib\>=1.2.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-learn-\>batchgenerators-\>acvl\_utils==0.2) (1.4.2)
> Collecting argparse (from unittest2-\>batchgenerators-\>acvl\_utils==0.2)
> Using cached argparse-1.4.0-py2.py3-none-any.whl.metadata (2.8 kB)
> Requirement already satisfied: six\>=1.4 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from unittest2-\>batchgenerators-\>acvl\_utils==0.2) (1.16.0)
> Requirement already satisfied: traceback2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from unittest2-\>batchgenerators-\>acvl\_utils==0.2) (1.4.0)
> Requirement already satisfied: linecache2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from traceback2-\>unittest2-\>batchgenerators-\>acvl\_utils==0.2) (1.0.0)
> Downloading connected\_components\_3d-3.22.0-cp39-cp39-win\_amd64.whl (545 kB)
> -------------------------------------- 545.5/545.5 kB 978.5 kB/s eta 0:00:00
> Using cached argparse-1.4.0-py2.py3-none-any.whl (23 kB)
> Building wheels for collected packages: acvl\_utils
> Building wheel for acvl\_utils (setup.py): started
> Building wheel for acvl\_utils (setup.py): finished with status 'done'
> Created wheel for acvl\_utils: filename=acvl\_utils-0.2-py3-none-any.whl size=22450 sha256=4dd58631f62b974d173a462023400c9d5b970cc13535e2723716f15d424e3f5b
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\db\\79\\df\\6ffb48299bba36fd2fc5d14dc8ae7d1caa3416aa7e96d605b7
> Successfully built acvl\_utils
> Installing collected packages: argparse, connected-components-3d, acvl\_utils
> Successfully installed acvl\_utils-0.2 argparse-1.4.0 connected-components-3d-3.22.0
> \`\`\`
> \
>
> \## Testing with SlicerTotalSegmentator
> I have also tested this in the context of \[SlicerTotalSegmentator\](https://github.com/lassoan/SlicerTotalSegmentator) . I have issued https://github.com/lassoan/SlicerTotalSegmentator/pull/67 to switch SlicerTotalSegmentator to also use SlicerNNUnet extension to avoid this situation again where SlicerTotalSegmentator got fixes that SlicerNNUNet did not get. I used a fresh install of Slicer 5.7.0-2024-12-31 with a cleared out system pip cache so that all downloads would be fresh.
>
> !\[image\](https://github.com/user-attachments/assets/aa47c1a1-ea49-491f-a6ea-929d8b51aaa1)
>
>
> \
> \SlicerTotalSegmentator python console output click here\
>
> \`\`\`python
> Python 3.9.10 (main, Dec 31 2024, 23:19:20) \[MSC v.1939 64 bit (AMD64)\] on win32
> \>\>\>
> Collecting pandas
> Downloading pandas-2.2.3-cp39-cp39-win\_amd64.whl.metadata (19 kB)
> Requirement already satisfied: numpy\>=1.22.4 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas) (1.26.4)
> Requirement already satisfied: python-dateutil\>=2.8.2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas) (2.9.0.post0)
> Collecting pytz\>=2020.1 (from pandas)
> Downloading pytz-2024.2-py2.py3-none-any.whl.metadata (22 kB)
> Collecting tzdata\>=2022.7 (from pandas)
> Downloading tzdata-2024.2-py2.py3-none-any.whl.metadata (1.4 kB)
> Requirement already satisfied: six\>=1.5 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from python-dateutil\>=2.8.2-\>pandas) (1.16.0)
> Downloading pandas-2.2.3-cp39-cp39-win\_amd64.whl (11.6 MB)
> ---------------------------------------- 11.6/11.6 MB 6.5 MB/s eta 0:00:00
> Downloading pytz-2024.2-py2.py3-none-any.whl (508 kB)
> ---------------------------------------- 508.0/508.0 kB 8.0 MB/s eta 0:00:00
> Downloading tzdata-2024.2-py2.py3-none-any.whl (346 kB)
> ---------------------------------------- 346.6/346.6 kB 2.0 MB/s eta 0:00:00
> Installing collected packages: pytz, tzdata, pandas
> Successfully installed pandas-2.2.3 pytz-2024.2 tzdata-2024.2
> Collecting light-the-torch\>=0.5
> Downloading light\_the\_torch-0.8.0-py3-none-any.whl.metadata (9.3 kB)
> Requirement already satisfied: pip\<24.4,\>=22.3 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from light-the-torch\>=0.5) (24.0)
> Downloading light\_the\_torch-0.8.0-py3-none-any.whl (14 kB)
> Installing collected packages: light-the-torch
> Successfully installed light-the-torch-0.8.0
> Collecting torch\>=2.0.0
> Downloading https://download.pytorch.org/whl/cu124/torch-2.5.1%2Bcu124-cp39-cp39-win\_amd64.whl (2510.7 MB)
> ---------------------------------------- 2.5/2.5 GB 1.4 MB/s eta 0:00:00
> Collecting torchvision
> Downloading https://download.pytorch.org/whl/cu124/torchvision-0.20.1%2Bcu124-cp39-cp39-win\_amd64.whl (6.1 MB)
> ---------------------------------------- 6.1/6.1 MB 16.4 MB/s eta 0:00:00
> Collecting filelock (from torch\>=2.0.0)
> Downloading https://download.pytorch.org/whl/filelock-3.13.1-py3-none-any.whl (11 kB)
> Requirement already satisfied: typing-extensions\>=4.8.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch\>=2.0.0) (4.12.1)
> Collecting networkx (from torch\>=2.0.0)
> Downloading https://download.pytorch.org/whl/networkx-3.2.1-py3-none-any.whl (1.6 MB)
> ---------------------------------------- 1.6/1.6 MB 17.6 MB/s eta 0:00:00
> Collecting jinja2 (from torch\>=2.0.0)
> Downloading jinja2-3.1.5-py3-none-any.whl.metadata (2.6 kB)
> Collecting fsspec (from torch\>=2.0.0)
> Downloading https://download.pytorch.org/whl/fsspec-2024.2.0-py3-none-any.whl (170 kB)
> ------------------------------------- 170.9/170.9 kB 10.0 MB/s eta 0:00:00
> Collecting sympy==1.13.1 (from torch\>=2.0.0)
> Downloading https://download.pytorch.org/whl/sympy-1.13.1-py3-none-any.whl (6.2 MB)
> ---------------------------------------- 6.2/6.2 MB 18.8 MB/s eta 0:00:00
> Collecting mpmath\<1.4,\>=1.1.0 (from sympy==1.13.1-\>torch\>=2.0.0)
> Downloading https://download.pytorch.org/whl/mpmath-1.3.0-py3-none-any.whl (536 kB)
> ------------------------------------- 536.2/536.2 kB 17.0 MB/s eta 0:00:00
> Requirement already satisfied: numpy in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torchvision) (1.26.4)
> Requirement already satisfied: pillow!=8.3.\*,\>=5.3.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torchvision) (10.3.0)
> Collecting MarkupSafe\>=2.0 (from jinja2-\>torch\>=2.0.0)
> Downloading MarkupSafe-3.0.2-cp39-cp39-win\_amd64.whl.metadata (4.1 kB)
> Downloading jinja2-3.1.5-py3-none-any.whl (134 kB)
> ---------------------------------------- 134.6/134.6 kB 1.6 MB/s eta 0:00:00
> Downloading MarkupSafe-3.0.2-cp39-cp39-win\_amd64.whl (15 kB)
> Installing collected packages: mpmath, sympy, networkx, MarkupSafe, fsspec, filelock, jinja2, torch, torchvision
> Successfully installed MarkupSafe-3.0.2 filelock-3.13.1 fsspec-2024.2.0 jinja2-3.1.5 mpmath-1.3.0 networkx-3.2.1 sympy-1.13.1 torch-2.5.1+cu124 torchvision-0.20.1+cu124
> Collecting nnunetv2\>=2.2.1
> Downloading nnunetv2-2.5.1.tar.gz (196 kB)
> -------------------------------------- 197.0/197.0 kB 1.5 MB/s eta 0:00:00
> Installing build dependencies: started
> Installing build dependencies: finished with status 'done'
> Getting requirements to build wheel: started
> Getting requirements to build wheel: finished with status 'done'
> Preparing metadata (pyproject.toml): started
> Preparing metadata (pyproject.toml): finished with status 'done'
> Building wheels for collected packages: nnunetv2
> Building wheel for nnunetv2 (pyproject.toml): started
> Building wheel for nnunetv2 (pyproject.toml): finished with status 'done'
> Created wheel for nnunetv2: filename=nnunetv2-2.5.1-py3-none-any.whl size=264428 sha256=2ad70af904a73190ecb38046a84d569b352f8421d6ca8b1a94ad512667b946c7
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\7b\\85\\af\\51e5381b7cf9cc417ca071b9cd6e35afc59236a0ebb4462249
> Successfully built nnunetv2
> Installing collected packages: nnunetv2
> Successfully installed nnunetv2-2.5.1
> Collecting dynamic-network-architectures\<0.4,\>=0.3.1
> Downloading dynamic\_network\_architectures-0.3.1.tar.gz (20 kB)
> Preparing metadata (setup.py): started
> Preparing metadata (setup.py): finished with status 'done'
> Building wheels for collected packages: dynamic-network-architectures
> Building wheel for dynamic-network-architectures (setup.py): started
> Building wheel for dynamic-network-architectures (setup.py): finished with status 'done'
> Created wheel for dynamic-network-architectures: filename=dynamic\_network\_architectures-0.3.1-py3-none-any.whl size=30056 sha256=8d7546a50ebdfbade048f7fcc67b577fd5b25971518e75e949b378afda3f6fc1
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\ec\\59\\c1\\e65ad8b5ac7df95651f913251875b4cc8275644e0e28e82c63
> Successfully built dynamic-network-architectures
> Installing collected packages: dynamic-network-architectures
> Successfully installed dynamic-network-architectures-0.3.1
> Collecting tqdm
> Downloading tqdm-4.67.1-py3-none-any.whl.metadata (57 kB)
> -------------------------------------- 57.7/57.7 kB 435.2 kB/s eta 0:00:00
> Downloading tqdm-4.67.1-py3-none-any.whl (78 kB)
> ---------------------------------------- 78.5/78.5 kB 2.2 MB/s eta 0:00:00
> Installing collected packages: tqdm
> Successfully installed tqdm-4.67.1
> Collecting colorama
> Downloading colorama-0.4.6-py2.py3-none-any.whl.metadata (17 kB)
> Downloading colorama-0.4.6-py2.py3-none-any.whl (25 kB)
> Installing collected packages: colorama
> Successfully installed colorama-0.4.6
> Collecting dicom2nifti
> Downloading dicom2nifti-2.5.1-py3-none-any.whl.metadata (1.3 kB)
> Downloading dicom2nifti-2.5.1-py3-none-any.whl (43 kB)
> ---------------------------------------- 43.6/43.6 kB 710.8 kB/s eta 0:00:00
> Installing collected packages: dicom2nifti
> Successfully installed dicom2nifti-2.5.1
> Collecting nibabel
> Downloading nibabel-5.3.2-py3-none-any.whl.metadata (9.1 kB)
> Downloading nibabel-5.3.2-py3-none-any.whl (3.3 MB)
> ---------------------------------------- 3.3/3.3 MB 5.7 MB/s eta 0:00:00
> Installing collected packages: nibabel
> Successfully installed nibabel-5.3.2
> Collecting importlib-resources\>=5.12
> Downloading importlib\_resources-6.4.5-py3-none-any.whl.metadata (4.0 kB)
> Downloading importlib\_resources-6.4.5-py3-none-any.whl (36 kB)
> Installing collected packages: importlib-resources
> Successfully installed importlib-resources-6.4.5
> Collecting zipp\>=3.1.0
> Downloading zipp-3.21.0-py3-none-any.whl.metadata (3.7 kB)
> Downloading zipp-3.21.0-py3-none-any.whl (9.6 kB)
> Installing collected packages: zipp
> Successfully installed zipp-3.21.0
> Collecting python-gdcm
> Downloading python\_gdcm-3.0.24.1-cp39-cp39-win\_amd64.whl.metadata (3.8 kB)
> Downloading python\_gdcm-3.0.24.1-cp39-cp39-win\_amd64.whl (28.9 MB)
> ---------------------------------------- 28.9/28.9 MB 4.8 MB/s eta 0:00:00
> Installing collected packages: python-gdcm
> Successfully installed python-gdcm-3.0.24.1
> Collecting batchgenerators\>=0.25
> Downloading batchgenerators-0.25.1.tar.gz (76 kB)
> -------------------------------------- 77.0/77.0 kB 717.5 kB/s eta 0:00:00
> Preparing metadata (setup.py): started
> Preparing metadata (setup.py): finished with status 'done'
> Building wheels for collected packages: batchgenerators
> Building wheel for batchgenerators (setup.py): started
> Building wheel for batchgenerators (setup.py): finished with status 'done'
> Created wheel for batchgenerators: filename=batchgenerators-0.25.1-py3-none-any.whl size=93102 sha256=ef464be755e76bb5c5f81ec906759fcf230d0aecd0aaa1c655e8072c0a965788
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\97\\8d\\b9\\3a9435d619b6a4bcd98f8cb8b324da29b6173555bb80860bdd
> Successfully built batchgenerators
> Installing collected packages: batchgenerators
> Successfully installed batchgenerators-0.25.1
> Collecting scikit-image
> Downloading scikit\_image-0.24.0-cp39-cp39-win\_amd64.whl.metadata (14 kB)
> Downloading scikit\_image-0.24.0-cp39-cp39-win\_amd64.whl (12.9 MB)
> ---------------------------------------- 12.9/12.9 MB 5.3 MB/s eta 0:00:00
> Installing collected packages: scikit-image
> Successfully installed scikit-image-0.24.0
> Collecting imageio\>=2.33
> Downloading imageio-2.36.1-py3-none-any.whl.metadata (5.2 kB)
> Downloading imageio-2.36.1-py3-none-any.whl (315 kB)
> ---------------------------------------- 315.4/315.4 kB 2.4 MB/s eta 0:00:00
> Installing collected packages: imageio
> Successfully installed imageio-2.36.1
> Collecting tifffile\>=2022.8.12
> Downloading tifffile-2024.8.30-py3-none-any.whl.metadata (31 kB)
> Downloading tifffile-2024.8.30-py3-none-any.whl (227 kB)
> ---------------------------------------- 227.3/227.3 kB 3.5 MB/s eta 0:00:00
> Installing collected packages: tifffile
> Successfully installed tifffile-2024.8.30
> Collecting lazy-loader\>=0.4
> Downloading lazy\_loader-0.4-py3-none-any.whl.metadata (7.6 kB)
> Downloading lazy\_loader-0.4-py3-none-any.whl (12 kB)
> Installing collected packages: lazy-loader
> Successfully installed lazy-loader-0.4
> Collecting scikit-learn
> Downloading scikit\_learn-1.6.0-cp39-cp39-win\_amd64.whl.metadata (15 kB)
> Downloading scikit\_learn-1.6.0-cp39-cp39-win\_amd64.whl (11.1 MB)
> ---------------------------------------- 11.1/11.1 MB 6.2 MB/s eta 0:00:00
> Installing collected packages: scikit-learn
> Successfully installed scikit-learn-1.6.0
> Collecting joblib\>=1.2.0
> Downloading joblib-1.4.2-py3-none-any.whl.metadata (5.4 kB)
> Downloading joblib-1.4.2-py3-none-any.whl (301 kB)
> ---------------------------------------- 301.8/301.8 kB 1.6 MB/s eta 0:00:00
> Installing collected packages: joblib
> Successfully installed joblib-1.4.2
> Collecting threadpoolctl\>=3.1.0
> Downloading threadpoolctl-3.5.0-py3-none-any.whl.metadata (13 kB)
> Downloading threadpoolctl-3.5.0-py3-none-any.whl (18 kB)
> Installing collected packages: threadpoolctl
> Successfully installed threadpoolctl-3.5.0
> Collecting future
> Downloading future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
> Downloading future-1.0.0-py3-none-any.whl (491 kB)
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> Installing collected packages: future
> Successfully installed future-1.0.0
> Collecting unittest2
> Downloading unittest2-1.1.0-py2.py3-none-any.whl.metadata (15 kB)
> Downloading unittest2-1.1.0-py2.py3-none-any.whl (96 kB)
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> Installing collected packages: unittest2
> Successfully installed unittest2-1.1.0
> Collecting argparse
> Downloading argparse-1.4.0-py2.py3-none-any.whl.metadata (2.8 kB)
> Downloading argparse-1.4.0-py2.py3-none-any.whl (23 kB)
> Installing collected packages: argparse
> Successfully installed argparse-1.4.0
> Collecting traceback2
> Downloading traceback2-1.4.0-py2.py3-none-any.whl.metadata (1.5 kB)
> Downloading traceback2-1.4.0-py2.py3-none-any.whl (16 kB)
> Installing collected packages: traceback2
> Successfully installed traceback2-1.4.0
> Collecting linecache2
> Downloading linecache2-1.0.0-py2.py3-none-any.whl.metadata (1000 bytes)
> Downloading linecache2-1.0.0-py2.py3-none-any.whl (12 kB)
> Installing collected packages: linecache2
> Successfully installed linecache2-1.0.0
> Collecting graphviz
> Downloading graphviz-0.20.3-py3-none-any.whl.metadata (12 kB)
> Downloading graphviz-0.20.3-py3-none-any.whl (47 kB)
> ---------------------------------------- 47.1/47.1 kB 784.8 kB/s eta 0:00:00
> Installing collected packages: graphviz
> Successfully installed graphviz-0.20.3
> Collecting matplotlib
> Downloading matplotlib-3.9.4-cp39-cp39-win\_amd64.whl.metadata (11 kB)
> Downloading matplotlib-3.9.4-cp39-cp39-win\_amd64.whl (7.8 MB)
> ---------------------------------------- 7.8/7.8 MB 4.5 MB/s eta 0:00:00
> Installing collected packages: matplotlib
> Successfully installed matplotlib-3.9.4
> Collecting contourpy\>=1.0.1
> Downloading contourpy-1.3.0-cp39-cp39-win\_amd64.whl.metadata (5.4 kB)
> Downloading contourpy-1.3.0-cp39-cp39-win\_amd64.whl (211 kB)
> ---------------------------------------- 211.8/211.8 kB 1.1 MB/s eta 0:00:00
> Installing collected packages: contourpy
> Successfully installed contourpy-1.3.0
> Collecting cycler\>=0.10
> Downloading cycler-0.12.1-py3-none-any.whl.metadata (3.8 kB)
> Downloading cycler-0.12.1-py3-none-any.whl (8.3 kB)
> Installing collected packages: cycler
> Successfully installed cycler-0.12.1
> Collecting fonttools\>=4.22.0
> Downloading fonttools-4.55.3-cp39-cp39-win\_amd64.whl.metadata (168 kB)
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> Downloading fonttools-4.55.3-cp39-cp39-win\_amd64.whl (2.2 MB)
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> Installing collected packages: fonttools
> Successfully installed fonttools-4.55.3
> Collecting kiwisolver\>=1.3.1
> Downloading kiwisolver-1.4.7-cp39-cp39-win\_amd64.whl.metadata (6.4 kB)
> Downloading kiwisolver-1.4.7-cp39-cp39-win\_amd64.whl (55 kB)
> ---------------------------------------- 55.8/55.8 kB 723.9 kB/s eta 0:00:00
> Installing collected packages: kiwisolver
> Successfully installed kiwisolver-1.4.7
> Collecting seaborn
> Downloading seaborn-0.13.2-py3-none-any.whl.metadata (5.4 kB)
> Downloading seaborn-0.13.2-py3-none-any.whl (294 kB)
> ---------------------------------------- 294.9/294.9 kB 2.0 MB/s eta 0:00:00
> Installing collected packages: seaborn
> Successfully installed seaborn-0.13.2
> Collecting imagecodecs
> Downloading imagecodecs-2024.12.30-1-cp39-cp39-win\_amd64.whl.metadata (19 kB)
> Downloading imagecodecs-2024.12.30-1-cp39-cp39-win\_amd64.whl (28.9 MB)
> ---------------------------------------- 28.9/28.9 MB 5.5 MB/s eta 0:00:00
> Installing collected packages: imagecodecs
> Successfully installed imagecodecs-2024.12.30
> Collecting yacs
> Downloading yacs-0.1.8-py3-none-any.whl.metadata (639 bytes)
> Downloading yacs-0.1.8-py3-none-any.whl (14 kB)
> Installing collected packages: yacs
> Successfully installed yacs-0.1.8
> Collecting PyYAML
> Downloading PyYAML-6.0.2-cp39-cp39-win\_amd64.whl.metadata (2.1 kB)
> Downloading PyYAML-6.0.2-cp39-cp39-win\_amd64.whl (162 kB)
> ---------------------------------------- 162.3/162.3 kB 1.6 MB/s eta 0:00:00
> Installing collected packages: PyYAML
> Successfully installed PyYAML-6.0.2
> Collecting batchgeneratorsv2\>=0.2
> Downloading batchgeneratorsv2-0.2.1.tar.gz (34 kB)
> Installing build dependencies: started
> Installing build dependencies: finished with status 'done'
> Getting requirements to build wheel: started
> Getting requirements to build wheel: finished with status 'done'
> Preparing metadata (pyproject.toml): started
> Preparing metadata (pyproject.toml): finished with status 'done'
> Building wheels for collected packages: batchgeneratorsv2
> Building wheel for batchgeneratorsv2 (pyproject.toml): started
> Building wheel for batchgeneratorsv2 (pyproject.toml): finished with status 'done'
> Created wheel for batchgeneratorsv2: filename=batchgeneratorsv2-0.2.1-py3-none-any.whl size=45216 sha256=27475a00e9a4228188ad2a80b706c400c9d2bb41ba896ea4983e7fe54ad6b285
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\8c\\29\\14\\3fdf4a97638724355746fb142b55db6868f1c0f1698af26ebd
> Successfully built batchgeneratorsv2
> Installing collected packages: batchgeneratorsv2
> Successfully installed batchgeneratorsv2-0.2.1
> Collecting fft-conv-pytorch
> Downloading fft\_conv\_pytorch-1.2.0-py3-none-any.whl.metadata (2.8 kB)
> Downloading fft\_conv\_pytorch-1.2.0-py3-none-any.whl (6.8 kB)
> Installing collected packages: fft-conv-pytorch
> Successfully installed fft-conv-pytorch-1.2.0
> Collecting einops
> Downloading einops-0.8.0-py3-none-any.whl.metadata (12 kB)
> Downloading einops-0.8.0-py3-none-any.whl (43 kB)
> ---------------------------------------- 43.2/43.2 kB 701.8 kB/s eta 0:00:00
> Installing collected packages: einops
> Successfully installed einops-0.8.0
> Collecting acvl\_utils==0.2
> Downloading acvl\_utils-0.2.tar.gz (18 kB)
> Preparing metadata (setup.py): started
> Preparing metadata (setup.py): finished with status 'done'
> Requirement already satisfied: numpy in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (1.26.4)
> Requirement already satisfied: batchgenerators in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (0.25.1)
> Requirement already satisfied: torch in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (2.5.1+cu124)
> Requirement already satisfied: SimpleITK in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (2.4.0rc2.dev213)
> Requirement already satisfied: scikit-image in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from acvl\_utils==0.2) (0.24.0)
> Collecting connected-components-3d (from acvl\_utils==0.2)
> Downloading connected\_components\_3d-3.22.0-cp39-cp39-win\_amd64.whl.metadata (32 kB)
> Requirement already satisfied: pillow\>=7.1.2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (10.3.0)
> Requirement already satisfied: scipy in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.13.1)
> Requirement already satisfied: scikit-learn in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.6.0)
> Requirement already satisfied: future in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.0.0)
> Requirement already satisfied: pandas in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (2.2.3)
> Requirement already satisfied: unittest2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (1.1.0)
> Requirement already satisfied: threadpoolctl in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from batchgenerators-\>acvl\_utils==0.2) (3.5.0)
> Requirement already satisfied: networkx\>=2.8 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (3.2.1)
> Requirement already satisfied: imageio\>=2.33 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (2.36.1)
> Requirement already satisfied: tifffile\>=2022.8.12 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (2024.8.30)
> Requirement already satisfied: packaging\>=21 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (24.0)
> Requirement already satisfied: lazy-loader\>=0.4 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-image-\>acvl\_utils==0.2) (0.4)
> Requirement already satisfied: filelock in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (3.13.1)
> Requirement already satisfied: typing-extensions\>=4.8.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (4.12.1)
> Requirement already satisfied: jinja2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (3.1.5)
> Requirement already satisfied: fsspec in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (2024.2.0)
> Requirement already satisfied: sympy==1.13.1 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from torch-\>acvl\_utils==0.2) (1.13.1)
> Requirement already satisfied: mpmath\<1.4,\>=1.1.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from sympy==1.13.1-\>torch-\>acvl\_utils==0.2) (1.3.0)
> Requirement already satisfied: MarkupSafe\>=2.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from jinja2-\>torch-\>acvl\_utils==0.2) (3.0.2)
> Requirement already satisfied: python-dateutil\>=2.8.2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas-\>batchgenerators-\>acvl\_utils==0.2) (2.9.0.post0)
> Requirement already satisfied: pytz\>=2020.1 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas-\>batchgenerators-\>acvl\_utils==0.2) (2024.2)
> Requirement already satisfied: tzdata\>=2022.7 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from pandas-\>batchgenerators-\>acvl\_utils==0.2) (2024.2)
> Requirement already satisfied: joblib\>=1.2.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from scikit-learn-\>batchgenerators-\>acvl\_utils==0.2) (1.4.2)
> Collecting argparse (from unittest2-\>batchgenerators-\>acvl\_utils==0.2)
> Using cached argparse-1.4.0-py2.py3-none-any.whl.metadata (2.8 kB)
> Requirement already satisfied: six\>=1.4 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from unittest2-\>batchgenerators-\>acvl\_utils==0.2) (1.16.0)
> Requirement already satisfied: traceback2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from unittest2-\>batchgenerators-\>acvl\_utils==0.2) (1.4.0)
> Requirement already satisfied: linecache2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from traceback2-\>unittest2-\>batchgenerators-\>acvl\_utils==0.2) (1.0.0)
> Downloading connected\_components\_3d-3.22.0-cp39-cp39-win\_amd64.whl (545 kB)
> ---------------------------------------- 545.5/545.5 kB 4.9 MB/s eta 0:00:00
> Using cached argparse-1.4.0-py2.py3-none-any.whl (23 kB)
> Building wheels for collected packages: acvl\_utils
> Building wheel for acvl\_utils (setup.py): started
> Building wheel for acvl\_utils (setup.py): finished with status 'done'
> Created wheel for acvl\_utils: filename=acvl\_utils-0.2-py3-none-any.whl size=22450 sha256=565173fa58e9c290bc076063b9a571d6180ba7ba9b545a89accc15ca6d731700
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\db\\79\\df\\6ffb48299bba36fd2fc5d14dc8ae7d1caa3416aa7e96d605b7
> Successfully built acvl\_utils
> Installing collected packages: argparse, connected-components-3d, acvl\_utils
> Successfully installed acvl\_utils-0.2 argparse-1.4.0 connected-components-3d-3.22.0
> Collecting https://github.com/wasserth/TotalSegmentator/archive/7274faac4673298d17b63a5a8335006f02e6d426.zip
> Downloading https://github.com/wasserth/TotalSegmentator/archive/7274faac4673298d17b63a5a8335006f02e6d426.zip
> / 8.3 MB 5.0 MB/s 0:00:01
> Installing build dependencies: started
> Installing build dependencies: finished with status 'done'
> Getting requirements to build wheel: started
> Getting requirements to build wheel: finished with status 'done'
> Preparing metadata (pyproject.toml): started
> Preparing metadata (pyproject.toml): finished with status 'done'
> Building wheels for collected packages: TotalSegmentator
> Building wheel for TotalSegmentator (pyproject.toml): started
> Building wheel for TotalSegmentator (pyproject.toml): finished with status 'done'
> Created wheel for TotalSegmentator: filename=TotalSegmentator-2.4.0-py3-none-any.whl size=348319 sha256=d4b53e53e781f64db7518e79038ab07cd4dc3720572b612ce20068d3811b0560
> Stored in directory: C:\\Users\\butlej30383\\AppData\\Local\\Temp\\pip-ephem-wheel-cache-shop\_\_u8\\wheels\\d8\\41\\ce\\20b3efb2dd6cebf94e551445b85bf8412c77d640fe7bd41cbb
> Successfully built TotalSegmentator
> Installing collected packages: TotalSegmentator
> Successfully installed TotalSegmentator-2.4.0
> Requirement already satisfied: numpy\<2 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (1.26.4)
> Requirement already satisfied: nibabel\>=2.3.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (5.3.2)
> Requirement already satisfied: importlib-resources\>=5.12 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel\>=2.3.0) (6.4.5)
> Requirement already satisfied: numpy\>=1.22 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel\>=2.3.0) (1.26.4)
> Requirement already satisfied: packaging\>=20 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel\>=2.3.0) (24.0)
> Requirement already satisfied: typing-extensions\>=4.6 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel\>=2.3.0) (4.12.1)
> Requirement already satisfied: zipp\>=3.1.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from importlib-resources\>=5.12-\>nibabel\>=2.3.0) (3.21.0)
> Requirement already satisfied: tqdm\>=4.45.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (4.67.1)
> Requirement already satisfied: colorama in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from tqdm\>=4.45.0) (0.4.6)
> Collecting p\_tqdm
> Downloading p\_tqdm-1.4.2.tar.gz (6.0 kB)
> Preparing metadata (setup.py): started
> Preparing metadata (setup.py): finished with status 'done'
> Requirement already satisfied: tqdm\>=4.45.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from p\_tqdm) (4.67.1)
> Collecting pathos\>=0.2.5 (from p\_tqdm)
> Downloading pathos-0.3.3-py3-none-any.whl.metadata (11 kB)
> Requirement already satisfied: six\>=1.13.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from p\_tqdm) (1.16.0)
> Collecting ppft\>=1.7.6.9 (from pathos\>=0.2.5-\>p\_tqdm)
> Downloading ppft-1.7.6.9-py3-none-any.whl.metadata (12 kB)
> Collecting dill\>=0.3.9 (from pathos\>=0.2.5-\>p\_tqdm)
> Downloading dill-0.3.9-py3-none-any.whl.metadata (10 kB)
> Collecting pox\>=0.3.5 (from pathos\>=0.2.5-\>p\_tqdm)
> Downloading pox-0.3.5-py3-none-any.whl.metadata (8.0 kB)
> Collecting multiprocess\>=0.70.17 (from pathos\>=0.2.5-\>p\_tqdm)
> Downloading multiprocess-0.70.17-py39-none-any.whl.metadata (7.2 kB)
> Requirement already satisfied: colorama in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from tqdm\>=4.45.0-\>p\_tqdm) (0.4.6)
> Downloading pathos-0.3.3-py3-none-any.whl (82 kB)
> ---------------------------------------- 82.1/82.1 kB 2.3 MB/s eta 0:00:00
> Downloading dill-0.3.9-py3-none-any.whl (119 kB)
> ---------------------------------------- 119.4/119.4 kB 7.3 MB/s eta 0:00:00
> Downloading multiprocess-0.70.17-py39-none-any.whl (133 kB)
> ---------------------------------------- 133.4/133.4 kB 4.0 MB/s eta 0:00:00
> Downloading pox-0.3.5-py3-none-any.whl (29 kB)
> Downloading ppft-1.7.6.9-py3-none-any.whl (56 kB)
> ---------------------------------------- 56.8/56.8 kB 2.9 MB/s eta 0:00:00
> Building wheels for collected packages: p\_tqdm
> Building wheel for p\_tqdm (setup.py): started
> Building wheel for p\_tqdm (setup.py): finished with status 'done'
> Created wheel for p\_tqdm: filename=p\_tqdm-1.4.2-py3-none-any.whl size=5426 sha256=9d00808bc6b757918c57dd5b8b837d71eda38aff24337ede80b337a47e6fe134
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\c1\\d1\\fa\\5b7790c4da9b335ab699bbb968084fc6faaf3187f3c16a908e
> Successfully built p\_tqdm
> Installing collected packages: ppft, pox, dill, multiprocess, pathos, p\_tqdm
> ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
> totalsegmentator 2.4.0 requires pyarrow, which is not installed.
> totalsegmentator 2.4.0 requires xvfbwrapper, which is not installed.
> Successfully installed dill-0.3.9 multiprocess-0.70.17 p\_tqdm-1.4.2 pathos-0.3.3 pox-0.3.5 ppft-1.7.6.9
> Collecting xvfbwrapper
> Downloading xvfbwrapper-0.2.9.tar.gz (5.6 kB)
> Preparing metadata (setup.py): started
> Preparing metadata (setup.py): finished with status 'done'
> Building wheels for collected packages: xvfbwrapper
> Building wheel for xvfbwrapper (setup.py): started
> Building wheel for xvfbwrapper (setup.py): finished with status 'done'
> Created wheel for xvfbwrapper: filename=xvfbwrapper-0.2.9-py3-none-any.whl size=5028 sha256=a4f52962b0dafc97ad74551b86c9da42d39ba63e9dea12a4a4c47261bbc25a88
> Stored in directory: c:\\users\\butlej30383\\appdata\\local\\pip\\cache\\wheels\\aa\\09\\0e\\c0fa4c721cfb0a003121597a24181add912b7488054d2311ad
> Successfully built xvfbwrapper
> Installing collected packages: xvfbwrapper
> ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
> totalsegmentator 2.4.0 requires pyarrow, which is not installed.
> Successfully installed xvfbwrapper-0.2.9
> Requirement already satisfied: dicom2nifti in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (2.5.1)
> Requirement already satisfied: nibabel in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from dicom2nifti) (5.3.2)
> Requirement already satisfied: numpy in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from dicom2nifti) (1.26.4)
> Requirement already satisfied: scipy in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from dicom2nifti) (1.13.1)
> Requirement already satisfied: pydicom\>=2.2.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from dicom2nifti) (2.4.4)
> Requirement already satisfied: python-gdcm in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from dicom2nifti) (3.0.24.1)
> Requirement already satisfied: importlib-resources\>=5.12 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel-\>dicom2nifti) (6.4.5)
> Requirement already satisfied: packaging\>=20 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel-\>dicom2nifti) (24.0)
> Requirement already satisfied: typing-extensions\>=4.6 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from nibabel-\>dicom2nifti) (4.12.1)
> Requirement already satisfied: zipp\>=3.1.0 in c:\\users\\butlej30383\\appdata\\local\\slicer.org\\slicer 5.7.0-2024-12-31\\lib\\python\\lib\\site-packages (from importlib-resources\>=5.12-\>nibabel-\>dicom2nifti) (3.21.0)
> Collecting pyarrow
> Downloading pyarrow-18.1.0-cp39-cp39-win\_amd64.whl.metadata (3.4 kB)
> Downloading pyarrow-18.1.0-cp39-cp39-win\_amd64.whl (25.3 MB)
> ---------------------------------------- 25.3/25.3 MB 6.0 MB/s eta 0:00:00
> Installing collected packages: pyarrow
> Successfully installed pyarrow-18.1.0
> \`\`\`
> \
>
> cc: @lassoan @Thibault-Pelletier
---
_[View the full topic](https://discourse.slicer.org/t/totalsegmentator-failed-to-compute-results-returned-non-zero-exit-status-1/38142)._