# TotalSegmentator for MRI dataset

**URL:** <https://discourse.slicer.org/t/totalsegmentator-for-mri-dataset/35080>\
**Category:** Support\
**Created:** [March 26, 2024, 1:26am UTC](https://discourse.slicer.org/t/totalsegmentator-for-mri-dataset/35080 "2024-03-26T01:26:34Z")\
**Posts on this page:** 1\
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**Author:** ![pieper](https://sea2.discourse-cdn.com/flex002/user_avatar/discourse.slicer.org/pieper/32/8_2.png) [@pieper](https://discourse.slicer.org/u/pieper)\
**Post date:** [March 26, 2024, 4:09pm UTC](https://discourse.slicer.org/t/totalsegmentator-for-mri-dataset/35080/3 "2024-03-26T16:09:08Z")

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We have a project underway to try training an MR segmenter based on TotalSegmentator using the SynthSeg approach (not muscles yet though). The preprint paper actually just went up on arxiv:

> **[Towards Automatic Abdominal MRI Organ Segmentation: Leveraging Synthesized...](https://arxiv.org/abs/2403.15609)**
>
> Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment abdominal organs...

Would be great to generalize to other segmentation tasks.

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