Reformat module keeps switching images back

scrmc
Tue, 07 Feb 2023 21:53:06 +0000
Support

Hi all,

I’m experiencing a somewhat strange issue with the Reformat module. Although I know it isn’t recommended, I unfortunately must read .mat files into Slicer. For some reason these are rotated when I first read them in, and I can’t seem to modify my MATLAB function to avoid this.

The reformat module lets me rotate them back to the way I would like them, but this never seems to last. So I will rotate one image, switch to view a different image, and when I come back to the original image it has “unrotated” and is back to the (bad) orientation it was first read in as. It admittedly isn’t a huge issue, but it is getting a bit tiresome having to rotate things a million times to view them properly.

Does anyone have a suggestion to avoid this, or has anyone else experienced this? Is this just an unavoidable thing that happens? Is reading in a mat file just a terrible idea and this is what I deserve for doing this?

Would be very grateful for anyone’s thoughts on this!

2 posts - 2 participants