# \#sitk

**URL:** https://discourse.slicer.org/tag/sitk/113.md

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## [Slicer error in getting segmentation when using monai label](https://discourse.slicer.org/t/slicer-error-in-getting-segmentation-when-using-monai-label/35477)

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**Author:** [@Sheng-xc](https://discourse.slicer.org/u/Sheng-xc)\
**Replies:** 4\
**Last updated:** [October 24, 2025, 2:39am UTC](https://discourse.slicer.org/t/slicer-error-in-getting-segmentation-when-using-monai-label/35477 "2025-10-24T02:39:58Z")

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Hi, I am working with Slicer5.6.2 and MONAILabel on my mac, using port forwarding from a Ubuntu server. The connection, server log, and client interface seem pretty good, but a slicer error raises everytime I try to g…

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## [Question About Using SimpleITK for Image Resampling](https://discourse.slicer.org/t/question-about-using-simpleitk-for-image-resampling/41703)

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**Author:** [@Linjun\_Yang](https://discourse.slicer.org/u/Linjun_Yang)\
**Replies:** 0\
**Last updated:** [February 14, 2025, 4:04pm UTC](https://discourse.slicer.org/t/question-about-using-simpleitk-for-image-resampling/41703 "2025-02-14T16:04:35Z")

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It’s my first time to ask a question in 3D Slicer forum so please bear with me if I fail to follow some rules. Thanks in advance! I am trying to use SimpleITK to resample a given CT image saved in Nifti format. The give…

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## [Trying to understand the different coordinate systems](https://discourse.slicer.org/t/trying-to-understand-the-different-coordinate-systems/27332)

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**Author:** [@spodamon](https://discourse.slicer.org/u/spodamon)\
**Replies:** 0\
**Last updated:** [January 18, 2023, 7:04pm UTC](https://discourse.slicer.org/t/trying-to-understand-the-different-coordinate-systems/27332 "2023-01-18T19:04:41Z")

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I am trying to make a bounding box based on a segmentation. I initially tried using SimpleITK and their LabelShapeStatisticsImageFilter class and their GetBoundingBox method to get some coordinates. When I tried doing th…

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## [Trying to update a slicer volume node from SimpleITKImage](https://discourse.slicer.org/t/trying-to-update-a-slicer-volume-node-from-simpleitkimage/2032)

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**Author:** [@drusmanbashir](https://discourse.slicer.org/u/drusmanbashir)\
**Replies:** 6\
**Last updated:** [March 1, 2021, 11:07am UTC](https://discourse.slicer.org/t/trying-to-update-a-slicer-volume-node-from-simpleitkimage/2032 "2021-03-01T11:07:09Z")

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Operating system: Window 7 Slicer version: 4.8.1 Hi All, I am a newbie. I am trying to develop a segmentation module using python. The main function takes as input a vtkMRMLLabelMapVolumeNode and a vtkMRMLScalarVolum…

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## [Extracting a 2d oblique plane using itk/vtk via python, (as shown in slicer view)](https://discourse.slicer.org/t/extracting-a-2d-oblique-plane-using-itk-vtk-via-python-as-shown-in-slicer-view/11250)

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**Author:** [@helenawill95](https://discourse.slicer.org/u/helenawill95)\
**Replies:** 5\
**Last updated:** [April 22, 2020, 8:19pm UTC](https://discourse.slicer.org/t/extracting-a-2d-oblique-plane-using-itk-vtk-via-python-as-shown-in-slicer-view/11250 "2020-04-22T20:19:43Z")

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Hello, I am currently using Slicer to manually find a slice- but I need to automate this. I was wondering if you could share any information how slicer displays the coronal view. My volume has a direction matrix \[0.9713…