I currently have an issue with opening a large number of nifti ct scans from the dataset i’m working on (totalsegmentator dataset). it throws an error: “itk only supports orthonormal direction cosines. no orthonormal definition found”. its because more restrictive checks on the input file thay’ve added in the last itk versions: Nifti files with non-orthonormal directional cosines should be read and the error changed to a warning. · Issue #3994 · InsightSoftwareConsortium/ITK · GitHub
Recently they have pushed a permissive mode to their code: ENH: Added permissive mode to NIFTI reader by vfonov · Pull Request #4009 · InsightSoftwareConsortium/ITK · GitHub
Please, add the permissive_mode to the itk version sdslicer works with
Is there any way i could update it manualy on my local installation of the 3d slicer?
thanks in advance