An approach to apply the proposed segmentation region from an ML model to DICOM data

Development
1

Hi all,
I would like to create a new extension which can do the following task:

  • Click a point on a DICOM data on Slicer (e.g. a point in a specific human organ)
  • Get that point and image, then pass them to the ML model. The model will output a proposed region for segmentation.
  • Pass the model’s output to Slicer and segment the region on Slicer.

I highly appreciate if you guys can recommend an approach to do those task. Thank you!

2

Sounds reasonable. You should review MONAI Label and TotalSegmentator to see what’s already possible. Then read the programming tutorials and read through the script repository.

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