Coordinate system in brainstorm SCS to coordinate system in 3D Slicer

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1

Dear Andras,
I am running into problem of converting the coordinates from SCS to world coordinate system.

I exported the mesh from brain storm and then importing it to 3D slicer.
It looks as below.

any idea on the transform.

coord

Regards,
Saima Safdar

2

By default Slicer uses LPS coordinate system for all data exported to files (mesh point coordinates, image physical coordinate system, etc.) and it assumes LPS coordinate system by default. I would recommend to ask brainstorm developers about how you can export the model from their software to the image’s original LPS coordinate system.

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