Does anyone know how to extract human skin?(about skin.py)

zhuyingxinxs · March 2, 2022, 2:11pm

I found the code for extracting skin in the following url,But how do I import my own DICOM data instead of using the MRHEAD example?

gist.github.com

https://gist.github.com/lassoan/1673b25d8e7913cbc245b4f09ed853f9

ExtractSkin.py

import SampleData
sampleDataLogic = SampleData.SampleDataLogic()
masterVolumeNode = sampleDataLogic.downloadMRHead()

# Create segmentation
segmentationNode = slicer.mrmlScene.AddNewNodeByClass("vtkMRMLSegmentationNode")
segmentationNode.CreateDefaultDisplayNodes() # only needed for display
segmentationNode.SetReferenceImageGeometryParameterFromVolumeNode(masterVolumeNode)
addedSegmentID = segmentationNode.GetSegmentation().AddEmptySegment("skin")

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