I am working with the .nii files to perform the DTI analysis and the .nii images are converted from Bruker file using Matlab. The problem I am facing is when using the Volumes module the software is not able to detect the diffusion component to select different components (the file format used: 4D nifti with 4th dimension as the 11 images from B0 to B10). I’d really appreciate if anyone can help with the issue I am facing. I can send a link to the file if required.
If it is not possible to use the .nii files for DTI analysis in Slicer then is there a way to convert Bruker file to .nrrd?