Is there a reason we are setting the include path to both source and the build directory for VTK and ITK? This means I have nearly 500 include directories for a single compiler invocation (macOS 10.12, SDK 10.13; Qt 5.9.3 from Qt Company package, etc.)
cat /tmp/one-clang-invocation | sed $'s/ /\\\n/g' | grep "\-I" | wc -l
493
where /tmp/one-clang-invocation
is the first line in Slicer-build/compile_commands.json
(with CMAKE_EXPORT_COMPILE_COMMANDS
enabled, and this PR):
"command": "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -DITKFactoryRegistration_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -DPYTHONQT_USE_RELEASE_PYTHON_FALLBACK -DvtkRenderingContext2D_AUTOINIT=\"1(vtkRenderingContextOpenGL2)\" -DvtkRenderingCore_AUTOINIT=\"3(vtkInteractionStyle,vtkRenderingFreeType,vtkRenderingOpenGL2)\" -DvtkRenderingOpenGL2_AUTOINIT=\"1(vtkRenderingGL2PSOpenGL2)\" -DvtkRenderingVolume_AUTOINIT=\"1(vtkRenderingVolumeOpenGL2)\" -ILibs/ITKFactoryRegistration/ITKIOFactoryRegistration -I/opt/bld/s5nj/ITKv4/Modules/IO/DCMTK/include -I/opt/bld/s5nj/ITKv4/Modules/IO/MINC/include -I/opt/bld/s5nj/ITKv4/Modules/Remote/MGHIO/include -I/opt/bld/s5nj/ITKv4/Modules/IO/TransformMatlab/include -I/opt/bld/s5nj/ITKv4/Modules/IO/TransformInsightLegacy/include -I/opt/bld/s5nj/ITKv4/Modules/IO/TransformHDF5/include -I/opt/bld/s5nj/ITKv4/Modules/IO/GIPL/include -I/opt/bld/s5nj/ITKv4/Modules/IO/NRRD/include -I/opt/bld/s5nj/ITKv4/Modules/IO/NIFTI/include -I/opt/bld/s5nj/ITKv4/Modules/IO/MRC/include -I/opt/bld/s5nj/ITKv4/Modules/IO/Meta/include -I/opt/bld/s5nj/ITKv4/Modules/IO/BioRad/include -I/opt/bld/s5nj/ITKv4/Modules/IO/Stimulate/include -I/opt/bld/s5nj/ITKv4/Modules/IO/VTK/include -I/opt/bld/s5nj/ITKv4/Modules/IO/TIFF/include -I/opt/bld/s5nj/ITKv4/Modules/IO/PNG/include -I/opt/bld/s5nj/ITKv4/Modules/IO/LSM/include -I/opt/bld/s5nj/ITKv4/Modules/IO/BMP/include -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/Expat/src/expat -I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/Expat/src/expat -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/GDCM/src/gdcm/Source/DataStructureAndEncodingDefinition -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/GDCM/src/gdcm/Source/MessageExchangeDefinition -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/GDCM/src/gdcm/Source/InformationObjectDefinition -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/GDCM/src/gdcm/Source/Common -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/GDCM/src/gdcm/Source/DataDictionary -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/GDCM/src/gdcm/Source/MediaStorageAndFileFormat -I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/GDCM/src/gdcm/Source/Common -I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/GDCM -I/opt/bld/s5nj/ITKv4/Modules/IO/GDCM/include -I/opt/bld/s5nj/ITKv4/Modules/IO/JPEG/include -I/opt/bld/s5nj/ITKv4/Modules/IO/TransformFactory/include -I/opt/bld/s5nj/ITKv4/Modules/Filtering/Path/include -I/opt/bld/s5nj/zlib-install/include -I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/ZLIB/src -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/opt/bld/s5nj/ITKv4/Modules/Core/SpatialObjects/include -I/opt/bld/s5nj/ITKv4/Modules/Filtering/ImageCompose/include -I/opt/bld/s5nj/ITKv4/Modules/Filtering/ImageStatistics/include -I/opt/bld/s5nj/ITKv4/Modules/Filtering/ImageIntensity/include 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-I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/KWSys/src -I/opt/bld/s5nj/ITKv4/Modules/ThirdParty/KWIML/src -I/opt/bld/s5nj/ITKv4-build/Modules/ThirdParty/KWIML/src -I/opt/bld/s5nj/ITKv4/Modules/Core/Common/include -I/opt/bld/s5nj/ITKv4-build/Modules/Core/Common -I/opt/bld/s5nj/ITKv4/Modules/IO/ImageBase/include -I/opt/bld/s5nj/ITKv4-build/Modules/IO/ImageBase -I/opt/bld/s5nj/VTKv9-build/Filters/Extraction -I/opt/bld/s5nj/VTKv9/Filters/Extraction -I/opt/bld/s5nj/VTKv9-build/Common/Core -I/opt/bld/s5nj/VTKv9/Common/Core -I/opt/bld/s5nj/VTKv9-build/Utilities/KWIML -I/opt/bld/s5nj/VTKv9/Utilities/KWIML -I/opt/bld/s5nj/VTKv9-build/Utilities/KWSys -I/opt/bld/s5nj/VTKv9/Utilities/KWSys -I/opt/bld/s5nj/VTKv9-build/ThirdParty/utf8 -I/opt/bld/s5nj/VTKv9/ThirdParty/utf8 -I/opt/bld/s5nj/VTKv9-build/Common/DataModel -I/opt/bld/s5nj/VTKv9/Common/DataModel -I/opt/bld/s5nj/VTKv9-build/Common/Math -I/opt/bld/s5nj/VTKv9/Common/Math -I/opt/bld/s5nj/VTKv9-build/Common/Misc -I/opt/bld/s5nj/VTKv9/Common/Misc -I/opt/bld/s5nj/VTKv9-build/Common/System -I/opt/bld/s5nj/VTKv9/Common/System -I/opt/bld/s5nj/VTKv9-build/Common/Transforms -I/opt/bld/s5nj/VTKv9/Common/Transforms -I/opt/bld/s5nj/VTKv9-build/Common/ExecutionModel -I/opt/bld/s5nj/VTKv9/Common/ExecutionModel -I/opt/bld/s5nj/VTKv9-build/Filters/Core -I/opt/bld/s5nj/VTKv9/Filters/Core -I/opt/bld/s5nj/VTKv9-build/Filters/General -I/opt/bld/s5nj/VTKv9/Filters/General -I/opt/bld/s5nj/VTKv9-build/Common/ComputationalGeometry -I/opt/bld/s5nj/VTKv9/Common/ComputationalGeometry -I/opt/bld/s5nj/VTKv9-build/Filters/Statistics -I/opt/bld/s5nj/VTKv9/Filters/Statistics -I/opt/bld/s5nj/VTKv9-build/Imaging/Fourier -I/opt/bld/s5nj/VTKv9/Imaging/Fourier -I/opt/bld/s5nj/VTKv9-build/Imaging/Core -I/opt/bld/s5nj/VTKv9/Imaging/Core -I/opt/bld/s5nj/VTKv9-build/ThirdParty/alglib -I/opt/bld/s5nj/VTKv9/ThirdParty/alglib -I/opt/bld/s5nj/VTKv9-build/Filters/FlowPaths -I/opt/bld/s5nj/VTKv9/Filters/FlowPaths -I/opt/bld/s5nj/VTKv9-build/Filters/Geometry -I/opt/bld/s5nj/VTKv9/Filters/Geometry -I/opt/bld/s5nj/VTKv9-build/Filters/Sources -I/opt/bld/s5nj/VTKv9/Filters/Sources -I/opt/bld/s5nj/VTKv9-build/IO/Core -I/opt/bld/s5nj/VTKv9/IO/Core -I/opt/bld/s5nj/VTKv9/ThirdParty/lz4/vtklz4/lib -I/opt/bld/s5nj/VTKv9-build/ThirdParty/lz4/vtklz4 -I/opt/bld/s5nj/VTKv9-build/ThirdParty/lz4 -I/opt/bld/s5nj/VTKv9/ThirdParty/lz4 -I/opt/bld/s5nj/VTKv9-build/ThirdParty/zlib -I/opt/bld/s5nj/VTKv9/ThirdParty/zlib -I/opt/bld/s5nj/VTKv9-build/GUISupport/QtOpenGL -I/opt/bld/s5nj/VTKv9/GUISupport/QtOpenGL -I/opt/bld/s5nj/VTKv9-build/GUISupport/Qt -I/opt/bld/s5nj/VTKv9/GUISupport/Qt -I/opt/bld/s5nj/VTKv9-build/Interaction/Style -I/opt/bld/s5nj/VTKv9/Interaction/Style -I/opt/bld/s5nj/VTKv9-build/Rendering/Core -I/opt/bld/s5nj/VTKv9/Rendering/Core -I/opt/bld/s5nj/VTKv9-build/Common/Color -I/opt/bld/s5nj/VTKv9/Common/Color -I/opt/bld/s5nj/VTKv9-build/Rendering/OpenGL2 -I/opt/bld/s5nj/VTKv9/Rendering/OpenGL2 -I/opt/bld/s5nj/VTKv9-build/ThirdParty/glew -I/opt/bld/s5nj/VTKv9/ThirdParty/glew -I/opt/bld/s5nj/VTKv9-build/GUISupport/QtSQL -I/opt/bld/s5nj/VTKv9/GUISupport/QtSQL -I/opt/bld/s5nj/VTKv9-build/IO/SQL -I/opt/bld/s5nj/VTKv9/IO/SQL -I/opt/bld/s5nj/VTKv9-build/ThirdParty/sqlite -I/opt/bld/s5nj/VTKv9/ThirdParty/sqlite -I/opt/bld/s5nj/VTKv9-build/IO/Export -I/opt/bld/s5nj/VTKv9/IO/Export -I/opt/bld/s5nj/VTKv9-build/IO/Image -I/opt/bld/s5nj/VTKv9/IO/Image -I/opt/bld/s5nj/VTKv9-build/Utilities/DICOMParser -I/opt/bld/s5nj/VTKv9/Utilities/DICOMParser -I/opt/bld/s5nj/VTKv9-build/Utilities/MetaIO/vtkmetaio -I/opt/bld/s5nj/VTKv9-build/Utilities/MetaIO -I/opt/bld/s5nj/VTKv9/Utilities/MetaIO -I/opt/bld/s5nj/VTKv9-build/ThirdParty/jpeg -I/opt/bld/s5nj/VTKv9/ThirdParty/jpeg -I/opt/bld/s5nj/VTKv9-build/ThirdParty/png -I/opt/bld/s5nj/VTKv9/ThirdParty/png -I/opt/bld/s5nj/VTKv9-build/ThirdParty/tiff/vtktiff/libtiff -I/opt/bld/s5nj/VTKv9-build/ThirdParty/tiff -I/opt/bld/s5nj/VTKv9/ThirdParty/tiff -I/opt/bld/s5nj/VTKv9-build/Rendering/Context2D -I/opt/bld/s5nj/VTKv9/Rendering/Context2D -I/opt/bld/s5nj/VTKv9-build/Rendering/FreeType -I/opt/bld/s5nj/VTKv9/Rendering/FreeType -I/opt/bld/s5nj/VTKv9-build/ThirdParty/freetype -I/opt/bld/s5nj/VTKv9/ThirdParty/freetype -I/opt/bld/s5nj/VTKv9-build/Rendering/GL2PSOpenGL2 -I/opt/bld/s5nj/VTKv9/Rendering/GL2PSOpenGL2 -I/opt/bld/s5nj/VTKv9-build/ThirdParty/gl2ps -I/opt/bld/s5nj/VTKv9/ThirdParty/gl2ps -I/opt/bld/s5nj/VTKv9/ThirdParty/libharu/vtklibharu/include -I/opt/bld/s5nj/VTKv9-build/ThirdParty/libharu/vtklibharu/include -I/opt/bld/s5nj/VTKv9-build/ThirdParty/libharu -I/opt/bld/s5nj/VTKv9/ThirdParty/libharu -I/opt/bld/s5nj/VTKv9-build/IO/Legacy -I/opt/bld/s5nj/VTKv9/IO/Legacy -I/opt/bld/s5nj/VTKv9-build/IO/PLY -I/opt/bld/s5nj/VTKv9/IO/PLY -I/opt/bld/s5nj/VTKv9-build/IO/XML -I/opt/bld/s5nj/VTKv9/IO/XML -I/opt/bld/s5nj/VTKv9-build/IO/XMLParser -I/opt/bld/s5nj/VTKv9/IO/XMLParser -I/opt/bld/s5nj/VTKv9-build/ThirdParty/expat -I/opt/bld/s5nj/VTKv9/ThirdParty/expat -I/opt/bld/s5nj/VTKv9-build/Imaging/Math -I/opt/bld/s5nj/VTKv9/Imaging/Math -I/opt/bld/s5nj/VTKv9-build/Imaging/Morphological -I/opt/bld/s5nj/VTKv9/Imaging/Morphological -I/opt/bld/s5nj/VTKv9-build/Imaging/General -I/opt/bld/s5nj/VTKv9/Imaging/General -I/opt/bld/s5nj/VTKv9-build/Imaging/Sources -I/opt/bld/s5nj/VTKv9/Imaging/Sources -I/opt/bld/s5nj/VTKv9-build/Imaging/Statistics -I/opt/bld/s5nj/VTKv9/Imaging/Statistics -I/opt/bld/s5nj/VTKv9-build/Imaging/Stencil -I/opt/bld/s5nj/VTKv9/Imaging/Stencil -I/opt/bld/s5nj/VTKv9-build/Interaction/Image -I/opt/bld/s5nj/VTKv9/Interaction/Image -I/opt/bld/s5nj/VTKv9-build/Imaging/Color -I/opt/bld/s5nj/VTKv9/Imaging/Color -I/opt/bld/s5nj/VTKv9-build/Interaction/Widgets -I/opt/bld/s5nj/VTKv9/Interaction/Widgets -I/opt/bld/s5nj/VTKv9-build/Filters/Hybrid -I/opt/bld/s5nj/VTKv9/Filters/Hybrid -I/opt/bld/s5nj/VTKv9-build/Filters/Modeling -I/opt/bld/s5nj/VTKv9/Filters/Modeling -I/opt/bld/s5nj/VTKv9-build/Imaging/Hybrid -I/opt/bld/s5nj/VTKv9/Imaging/Hybrid -I/opt/bld/s5nj/VTKv9-build/Rendering/Annotation -I/opt/bld/s5nj/VTKv9/Rendering/Annotation -I/opt/bld/s5nj/VTKv9-build/Rendering/Volume -I/opt/bld/s5nj/VTKv9/Rendering/Volume -I/opt/bld/s5nj/VTKv9-build/Rendering/ContextOpenGL2 -I/opt/bld/s5nj/VTKv9/Rendering/ContextOpenGL2 -I/opt/bld/s5nj/VTKv9-build/Rendering/Qt -I/opt/bld/s5nj/VTKv9/Rendering/Qt -I/opt/bld/s5nj/VTKv9-build/Filters/Texture -I/opt/bld/s5nj/VTKv9/Filters/Texture -I/opt/bld/s5nj/VTKv9-build/Rendering/Label -I/opt/bld/s5nj/VTKv9/Rendering/Label -I/opt/bld/s5nj/VTKv9-build/Rendering/VolumeOpenGL2 -I/opt/bld/s5nj/VTKv9/Rendering/VolumeOpenGL2 -I/opt/bld/s5nj/VTKv9-build/Testing/Rendering -I/opt/bld/s5nj/VTKv9/Testing/Rendering -I/opt/bld/s5nj/VTKv9-build/Testing/Core -I/opt/bld/s5nj/VTKv9/Testing/Core -I/opt/bld/s5nj/VTKv9-build/Views/Qt -I/opt/bld/s5nj/VTKv9/Views/Qt -I/opt/bld/s5nj/VTKv9-build/Infovis/Core -I/opt/bld/s5nj/VTKv9/Infovis/Core -I/opt/bld/s5nj/VTKv9-build/Views/Core -I/opt/bld/s5nj/VTKv9/Views/Core -I/opt/bld/s5nj/VTKv9-build/Views/Infovis -I/opt/bld/s5nj/VTKv9/Views/Infovis -I/opt/bld/s5nj/VTKv9-build/Charts/Core -I/opt/bld/s5nj/VTKv9/Charts/Core -I/opt/bld/s5nj/VTKv9-build/Filters/Imaging -I/opt/bld/s5nj/VTKv9/Filters/Imaging -I/opt/bld/s5nj/VTKv9-build/Infovis/Layout -I/opt/bld/s5nj/VTKv9/Infovis/Layout -I/opt/bld/s5nj/VTKv9-build/Wrapping/PythonCore -I/opt/bld/s5nj/VTKv9/Wrapping/PythonCore -I/opt/bld/s5nj/VTKv9-build/Utilities/Python -I/opt/bld/s5nj/VTKv9/Utilities/Python -I/opt/bld/s5nj/python-install/include/python2.7 -I/opt/bld/s5nj/VTKv9-build/Utilities/PythonInterpreter -I/opt/bld/s5nj/VTKv9/Utilities/PythonInterpreter -I/opt/bld/s5nj/VTKv9-build/Wrapping/Tools -I/opt/bld/s5nj/VTKv9/Wrapping/Tools -I/opt/bld/s5nj/CTK/Libs/Core -I/opt/bld/s5nj/CTK-build/CTK-build/Libs/Core -I/opt/bld/s5nj/CTK-build/CTK-build -I/opt/bld/s5nj/CTK/Libs/Widgets -I/opt/bld/s5nj/CTK-build/CTK-build/Libs/Widgets -I/opt/bld/s5nj/CTK/Libs/DICOM/Core -I/opt/bld/s5nj/CTK-build/CTK-build/Libs/DICOM/Core -I/opt/bld/s5nj/DCMTK-build/config/include -I/opt/bld/s5nj/DCMTK/ofstd/include -I/opt/bld/s5nj/DCMTK/oflog/include -I/opt/bld/s5nj/DCMTK/dcmdata/include -I/opt/bld/s5nj/DCMTK/dcmimgle/include -I/opt/bld/s5nj/DCMTK/dcmimage/include -I/opt/bld/s5nj/DCMTK/dcmjpeg/include -I/opt/bld/s5nj/DCMTK/dcmjpls/include -I/opt/bld/s5nj/DCMTK/dcmtls/include -I/opt/bld/s5nj/DCMTK/dcmnet/include -I/opt/bld/s5nj/DCMTK/dcmsr/include -I/opt/bld/s5nj/DCMTK/dcmsign/include -I/opt/bld/s5nj/DCMTK/dcmwlm/include -I/opt/bld/s5nj/DCMTK/dcmqrdb/include -I/opt/bld/s5nj/DCMTK/dcmpstat/include -I/opt/bld/s5nj/DCMTK/dcmrt/include -I/opt/bld/s5nj/DCMTK/dcmiod/include -I/opt/bld/s5nj/DCMTK/dcmfg/include -I/opt/bld/s5nj/DCMTK/dcmseg/include -I/opt/bld/s5nj/DCMTK/dcmtract/include -I/opt/bld/s5nj/DCMTK/dcmpmap/include -I/opt/bld/s5nj/CTK/Libs/DICOM/Widgets -I/opt/bld/s5nj/CTK-build/CTK-build/Libs/DICOM/Widgets 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