I am using a downloaded Slicer 4.9.0-2018-05-04 r27180. Using sample data MRBrainTumor1 and MRBrainTumor2, I try to register them using SlicerElastix extension. I tried a couple of presets (
3D MRI, monomodal (brain) among them), but that doesn’t seem to matter. After registration is finished:
Volume registration is started in working directory: C:/Temp/User/Slicer/Elastix/20180523_093922_751 Register volumes... Generate output... Registration is completed
Nothing looks changed. If I try to save the scene, the transform and resampled volume are not selected by default, meaning they are empty nodes.
If I go to the temp folder and load the intermediate images (e.g.
result.hdr), they are correctly resampled. Can anyone confirm this?