Export nrrd file from mhd file for 600 patients

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1

Operating system: mac os python 3.12
Slicer version:4.8.1
Expected behavior:I’ve 600 patients’ segmentation results of mhd/zraw files. I want to export them to NRRD files in 3D Slicer. However, applying this operation to each patient individually would be too time-consuming. Do you have any suggestions? I want use python to solve this problem.

2

This would be a pretty simple script - have you looked at examples in the script repository? Or you could ask a chatbot for advice and the come back here if you have specific questions.

3

I have read the script repository, but I still have some problems. Could you please point out the specific script to me from the script repository, I will add the loops to it later. Thanks so much.

4

This looks like what you need.

Read the files and write them to the new format and loop over your file list.

5

Thanks！ It helps a lot!