Hi, I’ve been reading the threads about naming/numbering and the colormaps for segmentations: Export Segmentation as Labeled LabelMap Copying segment names/colors from one segmentation to another I am not sure to be able to export the labels according to the colortable properly: similar to @appa…

[image] jhlegarreta: I made sure that I am using exactly the names in my colortable, and have simplified it t As I wrote above, you need to use the color names that show up in Colors module, which is not exactly what is stored internally in the color table file (due to spaces are replaced by …

Exporting a segmentation paired to a custom colortable

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lassoan (Andras Lasso) Split this topic April 29, 2024, 1:55pm 9

10 posts were split to a new topic: Create standard terminology for new segmentation project

Topic		Replies	Views
Preserve colors from segment editor node and export it as Nifti LabelMap Support segmentation , nifti , file-export , labelmap	8	579	December 1, 2023
Segmentation terminology to labelmap indices Support segmentation , segment	2	224	January 23, 2023
Add Segment to SegmentationNode uses invalid color values (scalar) and adds a new colortable node Support segmentation , python , custom-color-table	5	40	January 3, 2026
Incorrect values when converting segmentation to binary labelmap Support	20	153	June 3, 2025
Export Segmentation as Labeled LabelMap Support	17	3671	May 12, 2023

Exporting a segmentation paired to a custom colortable

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