Hi, is there an option to get the image normalized?, because after run the feature extraction I checked the histogram of the image from which I extracted the features and it didn’t change. (I have normalize enabled in the script)
You can set the same window/level settings by either right-clicking on the volume in a slice view and selecting the same “Window/level preset”; or in Volumes module’s Display section make sure you have the same
L (window and level) values for your volumes.
Hi Andras, I’ve checked the histogram from the volume information and then plotted the histogram, so I think that is not the problem. I’ve attached the parameters I’m using, I’ve also tried running the extraction with the manual customization. Do I need to add anything else? thank you, appreciate your help!
normalizeScale: 100 # This allows you to use more or less the same bin width.
#Resegmentation: remove outliers
resegmentRange: [-3, 3]
I’m not experienced with how to configure SlicerRadiomics. Maybe @JoostJM or other radiomics experts can help.