I want to show the vessel in planar. Now I have a .csv file of centerline, that contains points of the veseel. How to reconstruction the vessel plannar from centerline file? How to import the csv file as a list of some point? How to reconstruction and show in the window? And If the centerline fil…

[image] RayCui: How to import the csv file as a list of some point? You can load a curve from a CSV file that has this structure: # Markups fiducial file version = 4.11 # CoordinateSystem = 0 # columns = id,x,y,z,ow,ox,oy,oz,vis,sel,lock,label,desc,associatedNodeID 1,-48.966353538964675,-101…

Where can I download Slicer rev 28672 or later? This link contains the newest Preview Release is rev 28669. https://download.slicer.org/

Hi Andras, Sometimes people end up having to scan coiled snakes, or fish that are in little jars. Depending on what they need to do with it, they may have to ‘straighten’ the specimen. Is there a way this CPR can be generalized for such use cases? [image] [image]

Is this micro-CT and has any three dimensional sigmentation?

The module is already completely generic, so it can straighten snakes just as well as vessels. It would be great if you could post a few examples. Here is one snake from MorphoSource straightened: [image] if the specimen touches itself then you need to apply masking and sharp breaks and wrinkles…

I cannot find the the curve planar reformat module to do this ? Where can i find it ? i am using the stable version and the nightly build 28669. Or can you point me to a tutorial where i could do this please ? thank you

Extensions are not available yet for 28669. Probably because today is Wednesday and Windows patches are usually installed Tuesday nights, which can interrupt the nightly build process. I expect the extensions will be available in a few hours. @Sam_Horvath Could you check the factory machines / rest…

[image] lassoan: Could you check the factory machines / restart the extensions build? After the associated build directory is cleaned, the extension build will be restarted. Update: Windows extensions build in progress :hourglass_flowing_sand:

Wow, this looks great thank you Andras!

Hi everyone, I have been trying to figure this module out for a while now. Unfortunately I’m not getting the same results as you. Would someone mind posting a youtube video on exactly how this works. It seems pretty straight forward but I think the rotation angle is messing me up? Also if the C…

Also, which series are you using from the data set? Thanks!

How to implement CPR (curved planar reconstruction) from centerline?

Support

Topic		Replies	Views
How to Create panoramic X-ray from Ct scan , I can't find CPR Support dental	8	712	January 15, 2024
How to get the coordinates of intersection between vessel centerline and sequential MRI/CT slices in markup fiducials? Support	5	1758	July 4, 2018
How to make fiducial points placed in Curved Planar Reformatted image appear in the original image Support feature	9	1286	June 30, 2020
CPR transformation for CT/CTA data in Slicer Support	2	302	August 25, 2023
Curved Planar Reformat module results inaccurate Support	2	1256	March 17, 2021

How to implement CPR (curved planar reconstruction) from centerline?

Related topics