Implementing a deep learning based image segmentation in Slicer3D

Development
1

Hello,

I am trying to develop a deep learning based image segmentation of pelvic bone region. During my search for open source training dataset I came across a paper which has already implemented a good strategy for doing so. The paper is implemented in Pytorch and makes use of MONAI framework in the process. I am attaching the link of the github repository.

[GitHub - ICT-MIRACLE-lab/CTPelvic1K: Resources of the paper “Deep Learning to Segment Pelvic Bones: Large-scale CT Datasets and Baseline Models”.]

(GitHub - ICT-MIRACLE-lab/CTPelvic1K: Resources of the paper “Deep Learning to Segment Pelvic Bon)

I wanted to ask as to how much time would it take to transfer the implementation from PYtorch format to start using it in Slicer3D for the segmentation purposes?

Thanks

2

You can use pytorch directly in Slicer now, so it should be pretty straightforward to bring that into Slicer.

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