Hi, I have been working in python on a new deep learning algorithm. I would like to use Slicer to display the output to evaluate, but I am not sure how to import the output npz files into slicer for display, nor how to convert it into a SimpleITK image for proper orientation in Slicer and create a m…

Importing Numpy & NPZ files into Slicer

lassoan (Andras Lasso) Split this topic November 8, 2019, 5:59pm 16

Topic		Replies	Views
Import Numpy File in as image volume Support volume , binarylabelmap , file-import	5	3611	December 12, 2022
Is it possible to export image + segment as .npz image? Support	6	565	February 7, 2022
Handle additional images as numpy arrays in Slicer Support python	9	1569	January 7, 2019
Import nifti segmentation files Support	3	680	April 12, 2024
Getting vtkMRMLSliceNodeGreen, vtkMRMLSliceNodeRed, vtkMRMLSliceNodeYellow data into numpy array Development dicom	3	721	February 25, 2020