Good afternoon, I’m trying to save a big bunch of .stl files to .nrrd binary label maps through python. I’m using the code below: volume = slicer.util.loadVolume('C:\\Users\mreib\OneDrive - upf.edu\Burdeos\images\Bordeaux_Case1\image.mha', returnNode=True) segmentation = slicer.util.loadSegmentati…

It is almost as simple. You can use PythonSlicer Myscript.py (there are a couple of variants - see here ).

Load a .stl file and save it to a binary label map through

lassoan (Andras Lasso) Split this topic March 29, 2021, 12:34am 6

2 posts were split to a new topic: Combine STLs and export as NRRD

Topic		Replies	Views
Save .nrrd file into STL file Support	5	5141	March 3, 2022
Combine STLs and export as NRRD Development segmentation	3	827	December 11, 2021
Segmentation to binary label map through python console Support	3	2173	February 1, 2018
Converting .stl files to binary label maps in .nii format using Python Support segmentation , python , binarylabelmap , stl	10	5691	February 18, 2023
Export segmentation to labelmap using python Support registration , segmentation , python	12	4219	January 16, 2023