I am new here. I am doing my medical physics masters and my thesis heavily involves 3D Slicer. In short a lung sample was imaged using a special x-ray technique. Than the cells in this sample was dyed. I can use this dyed cell slices (only 7 slices across the sample) to segment different types of cells. Than I want to use one part of this segmentation (the other part is for testing) to do radiomic analysis with it.
The segmentation might take a long time because I think I cannot make it automatic. So I segment every 10th-5th (there is about 900) slice and than I’ll use 'Fill between Slices". Do you think it is a suitable solution?
After that I will do some pre-processing and than radiomic analysis. After dimension reduction I would like to train an AI. To test the performance of the AI I want to use the segmented cells I did not use for the radiomic part. Can I/Should I do this whole thing (dimension reduction and AI training) in 3D Slicer.
I appreciate every advises and suggestions.
Thank you in advance!