In the recent versions of Slicer, I am having a hard time exporting a resampled volume from a linear transform. Hardening simply changes the image direction matrix, so does the crop volume (when the image is under a linear transform). I am pretty sure at some point Crop Volume used to create a resam…

This is now implemented. See the thread [image] Creating ROI box markups in image coordinates (rather than anatomical coordinates) Support for posterity this feature is now implemented in slicer, and part of the CropVolume module since Sept 21s. To align yo…

Resampling a linear transformation

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lassoan (Andras Lasso) May 15, 2025, 5:04am 7

I agree, this feature will make it easier to create an RAS-axis-aligned volume by resampling.

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Creating ROI box markups in image coordinates (rather than anatomical coordinates)

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Resampling a linear transformation

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