Operating system: Windows 7 enterprise 64bit Slicer version:4.6.2 Expected behavior: I expect to visualize in 3D space the files .stl or .ply surfaces correctly alligned with the nifti anatomical image (on which I have segmented them with Amira). Actual behavior: I viausliaze the multiple .stl…

Most common issue is LPS/RAS coordinate system mismatch. See this post about how this inconsistency can be fixed: [image] DICOM and VTK file orientation Issue Development Most common issue is LPS/RAS coordinate system mismatch. So, may try to convert your data from LPS to…

Saved surface model is not aligned with volume when viewed in external software

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Saved surface model is not aligned with volume when viewed in external software

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