Hi Slicer community, I am trying to perform what I thought would be a straightforward task of loading a study into slicer and saving a few images from each of the viewing panes (red, yellow, green) into PNG or jpg files. My script is based off example code here: https://www.slicer.org/wiki/Documen…

Thanks very much for the advice. Unfortunately, my project requires the linux machine to run automatically without a VNC connection to it. However, you did help me find a solution using a different method through an old post you made: https://sourceforge.net/p/teem/mailman/message/27766556/ I thin…

Saving images from slicer views in headless compute node

Development

pieper (Steve Pieper (Isomics, Inc.)) April 19, 2017, 3:27pm 9

(Edited the previous post to use display :11 rather than :1 to match Mike’s use case)

Color problems accessing Slicer3D on an Ubuntu install

Topic		Replies	Views
Running Slicer without GUI? Support	17	4031	November 7, 2021
How to use Screen Capture Module to save slices as .png files one-by-one along one axial? Support screen-capture	24	3513	July 14, 2022
Bundle file creation Support	6	1280	April 10, 2020
Saving series of images from a Slice View Development	5	1702	May 21, 2018
Export image series in different projections from .nii file Support file-export	3	263	August 17, 2021

Saving images from slicer views in headless compute node

Related topics