MacOS. The same issue occurs with the stable release 4.11.20210226 and with several preview releases, including the latest 4.13.0, revision 30657, built 2022-02-26
Yes, I tried saving and loading with the stable and preview versions.
I think I narrowed the problem a bit down:
Even though in the tree it looks like the parents are correctly assigned, they are not (this screenshot was of the state that was saved to an .mrb):
Thanks for the further investigation! So it seems that the problem is not on the save/load (i.e. MRML) side but the SH tree widget / model side.
How do you put these volumes under the folder? I know it’s a strange question, but maybe you do something extra we don’t. Also, not sure if you have access to another operating system (Windows or Linux) but if you could try the same thing it would help.