Operating system: Mac OSX 10.9.5 Slicer version: 4.7 I am trying to run a registration in the BRAINS module, that is somewhat unique and different from the sample cases given online. I have a grayscale FA scalar volume image file (obtained from a DTI volume file), and I have generated an FEM mask …

[image] Rewati_Kulkarni: Changing the visibility of the files does not help at all. I am able to only see the file I load last, whichever it may be This is because the two volumes don’t overlap at all (this confirms that the “Joint PDF summed to zero” error is due to non-overlapping contours)…

General registration (BRAINS) returns "Joint PDF summed to zero" error

Support

ihnorton (Isaiah Norton) Split this topic April 20, 2018, 2:03pm 9

2 posts were merged into an existing topic: Gen Registration (Brains) fails despite overlap of series

Topic		Replies	Views
General registration(BRAINS) error"LBFGSB optimizer does not support scaling. All scales are set to one. " Support registration	1	1125	July 28, 2019
General Registration (BRAINS) error Support registration	5	729	February 26, 2020
Multi Orientation Image Registration Support	7	747	March 27, 2018
BRAINS Registration fails in V4.11.20210226 Support registration	3	307	December 9, 2021
Problems with BRAINSfit and Elastix Support	1	1382	October 16, 2018

General registration (BRAINS) returns "Joint PDF summed to zero" error

Related Topics