Build fails on Linux : configuration incomplete

Support
1

My weekly build fails today when configuring Slicer itself :

– Setting CPACK_PACKAGE_INSTALL_DIRECTORY to ‘Slicer 4.11.0-2020-03-28’
– Setting CPACK_PACKAGE_DESCRIPTION_FILE to ‘/home/arc/src/Slicer/README.txt’
– Setting CPACK_RESOURCE_FILE_LICENSE to ‘/home/arc/src/Slicer/License.txt’
– Setting CPACK_PACKAGE_DESCRIPTION_SUMMARY to ‘Medical Visualization and Processing Environment for Research’
– Configuring incomplete, errors occurred!
See also “/home/arc/src/Slicer-SuperBuild-clang/Slicer-build/CMakeFiles/CMakeOutput.log”.
See also “/home/arc/src/Slicer-SuperBuild-clang/Slicer-build/CMakeFiles/CMakeError.log”.

Please see CMakeError.log for gcc and clang.

Slicer is configured in empty superbuild directories as such :

export CFLAGS=" -I/usr/include/tirpc"
export CXXFLAGS=“-I/usr/include/tirpc”
cmake -DSlicer_VTK_VERSION_MAJOR:INT=8 -DQt5_DIR:PATH=/usr/lib/cmake/Qt5 -DSlicer_USE_PYTHONQT_WITH_OPENSSL:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMAKE_BUILD_TYPE:STRING=Release -DADDITIONAL_CXX_FLAGS:STRING=-I/usr/include/tirpc …/Slicer

Please advise for a fix.

Regards.

2

You can find the actual CMake error message further up (it starts with CMake Error and contains a description of the problem and a call stack). Information in CMakeError.log and CMakeOutput.log are generally useless (they are too low-level).

1 Like
3

The only CMake Error I could find is :

CMake Error at Libs/CMakeLists.txt:105 (add_subdirectory):
The source directory

/home/arc/src/Slicer-SuperBuild/vtkAddon

does not contain a CMakeLists.txt file.

In effect, Slicer-SuperBuild/vtkAddon is empty.

Using cmake version 3.16.5.

4

You just need to start the superbuild one more time and it will complete successfully. Here’s the ticket to track it

By the way since this is not yet fixed, I wonder why the factory builds do not fail.

5

Yes, it does build when issuing make again.
Thanks.