Hi, I have NIFTI files of sizes (512 x 512 x 150) of auto-segmentation and manual segmentation. Each file/slice contains the segmentation of multiple regions (seven regions). I want to compute the dice score, Hausdorff distance, Jaccard index, and average surface distance. Could you please suggest…

The Segment Comparison module in the SlicerRT extension allows you to compute Dice and Hausdorff on segmentations containing multiple labels. You’ll need to first convert the labelmap volumes to segmentation nodes (in Segmentations module Import/Export section, or in the Data module by right-clickin…

Compute Dice score, Hausdorff distance for Multi-Region segmentation

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cpinter (Csaba Pinter) Split this topic May 10, 2024, 11:49am 10

3 posts were merged into an existing topic: Hausdorff Distance Interval

Topic		Replies	Views
Segmentation Comparsion Support slicerrt	2	1588	December 11, 2019
DiceComputation module does not calculate Support	15	1332	September 21, 2020
Segment comparison returns 0 for all metrics Development slicerrt	15	684	July 5, 2019
Hausdorff and Dice calculation principle Support segmentation	2	592	February 8, 2024
segment comparison and mesh statistics Support segmentation , dicom	3	1161	October 2, 2018

Compute Dice score, Hausdorff distance for Multi-Region segmentation

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