Hi, I have NIFTI files of sizes (512 x 512 x 150) of auto-segmentation and manual segmentation. Each file/slice contains the segmentation of multiple regions (seven regions). I want to compute the dice score, Hausdorff distance, Jaccard index, and average surface distance. Could you please suggest…

The Segment Comparison module in the SlicerRT extension allows you to compute Dice and Hausdorff on segmentations containing multiple labels. You’ll need to first convert the labelmap volumes to segmentation nodes (in Segmentations module Import/Export section, or in the Data module by right-clickin…

Compute Dice score, Hausdorff distance for Multi-Region segmentation

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cpinter (Csaba Pinter) Split this topic May 10, 2024, 11:49am 10

3 posts were merged into an existing topic: Hausdorff Distance Interval

Topic		Replies	Views
Segmentation Comparsion Support slicerrt	2	1565	December 11, 2019
Hausdorff and Dice calculation principle Support segmentation	2	529	February 8, 2024
DiceComputation module does not calculate Support	15	1315	September 21, 2020
Segment comparison returns 0 for all metrics Development slicerrt	15	666	July 5, 2019
Repeated Segment Comparison Metric Calculations Support segmentation , slicerrt , python	0	9	July 8, 2025

Compute Dice score, Hausdorff distance for Multi-Region segmentation

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