We have a number of OCT with segmentation data done with legacy systems. I would like to convert the OCT files are DICOM files and they load mostly alright. They are loaded by drag and drop and selecting volume. The .nrrd files that I created are also loaded with drag and drop with segmentation sele…

Lassoan and Mike, Thanks. Changing to cap S worked. Sorry to have bothered you with some so simple. Mark

Create .seg.nrrd file outside of slicer

mikebind (Mike Bindschadler) October 17, 2023, 3:48pm 4

You might find the following thread helpful: .seg.nrrd versus .nrrd

Also, here is the documentation page on the .seg.nrrd format: Segmentations — 3D Slicer documentation

Topic		Replies	Views
.seg.nrrd and .nrrd to dicom Support segmentation , dicom	3	242	May 8, 2023
.seg.nrrd versus .nrrd Support	9	2211	October 27, 2024
How can I convert an rtstruct to an nrrd Support	10	2584	March 5, 2018
Segment Editor color/name template Support	4	986	April 4, 2020
Read Dicom label map and export .nrrd label map Support segmentation , dicom , nrrd , labelmap	3	852	January 23, 2021