Elastix via command line

(alex goehler) #1

Hi Andras et al,

I truly enjoy the elastix module. Given that have a large amount of data that I would like process, I am looking for easiest way to do this via a command line. Is there anything available that is close to BRAINSfit (via CLI)?


(Murat Maga) #2

If you need to process many datasets, you will probably be better of running Elastix directly, unless you need some sort of interaction with Slicer as a preprocessing step.

(alex goehler) #3

Thanks for your quick response. I am currently compiling it.

(Adam Rankin) #4

This may be of use: