This is exactly what I need!! I would really like to develop an extension combining all those steps. Is this possible? I just started reading about developing own modules/extensions and trying some things. I would like to make vessel segmentation easier for people who aren’t familiar with 3DSlicer.
I think I’m a bit more familiar with Slicer extensions by now. I created a new scripted module in Python using the Extension Wizard and I figured out how to design the user interface and how this kind of extension is working in general.
So, to start with an easier project, I’m trying the following:
work on a chosen input volume
use threshold (IsoData) to create a segment
split segment into islands
chose resulting segment(s) and export as stl
(This is already working well for vessel-segmentation with high-contrast MRI.)
Anyway, I still don’t know how to use the Segment Editor functionality in my own extension. Is there an easy way? I still have problems understanding the slicer module hierarchy…