Hello all, I am trying to run GTRACT programs in Slicer 4.10.2. on Windows 10. I´ve downloaded the GTRACT folder: https://github.com/BRAINSia/BRAINSTools . Please, could you advise me what next I should do to run GTRACT programs? Are GTRACT programs used in command line or in GUI as well?
Thanks a lot
Adam
Not sure of the status of that - maybe best to start at Vince’s page: https://www.nitrc.org/projects/vmagnotta
Hello Steve, yeah I know. I downloaded the GTRACT set in this page https://www.nitrc.org/projects/vmagnotta. How to run the GTRACT tools in 3D Slicer - can it be run through Command Line or in GUI as well? Where in the Slicer 4.10. folder should I put the GTRACT folder I downloaded? I am running on Windows 10. I am new to 3D Slicer so I´m sorry for these questions.
Hi Adam - You should probably try contacting Vince for details. I believe GTRACT is a command line module that only uses ITK and C++ so it could be ported to the current Slicer if it hasn’t been already.
On the other hand if your goal is to do tractography you could also look at SlicerDMRI, which is actively maintained.