How can I configure Slicer to open automatically with my preferred settings for the View Controllers module?

You only need a volume for editing segmentations. Some Segment Editor effects would not need it, but it was easier to just make this a prerequisite for segmentation.

Correct.

Correct. Since image resampling is a lossy operation, and it is particularly bad for binary images, it is better to avoid changing geometry of existing segmentations. However, a one-time cropping and resampling to isotropic spacing before starting segmentation is usually beneficial.

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