I’m new to 3D Slicer. I have a sequence of radial OCT images(as jpg). How can I load it to slicer and reconstruct it? Really appreciate your help.

Please follow the method described in this topic: [image] 3D reconstruction of radial OCT slices Support Hi everyone! I’m working on radial OCT scans of the optic nerve head (eye), and the slices are rotated from each other by 15°. Since I don’t have parallel slices, I’…

Thanks for your reply. I read this method, but there are many details that confuse me. For example, how to use the Transforms module to set the origin, spacing, and axis directions for each image slice? Also, is it right to run the code line by line in the python interactor window?

[image] coastcode: how to use the Transforms module to set the origin, spacing, and axis directions for each image slice? You can set spacing by modifying the first 3 diagonal elements of the transformation matrix. You can set the origin and axis direction by using the transform sliders. It …

I have 128 images, rotated 180 degrees in total, with the rotation axis in the middle.

How to import a sequence of radial OCT image(.jpg)

Support

lassoan (Andras Lasso) June 24, 2022, 5:01am 2

Please follow the method described in this topic:

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How to import a sequence of radial OCT image(.jpg)

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