INHS module: unable to import image from table.

Support
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1

Sorry if this is the wrong forum to ask for advice, but I recently installed slicer on my arch build and installed 3dSlicer. I’m trying to load an image in slicer morph from a table that has a URL. The URL resolves outside of slicer morph, however when selecting the image to load, the terminal output is:

    <b>	Download failed: <urlopen error [Errno 110] Connection timed out></b>
    <b>Download failed (attempt 1 of 3)...</b> 
    <b>	Download failed: <urlopen error [Errno 110] Connection timed out></b>
    <b>Download failed (attempt 2 of 3)...</b>
    error: [/opt/3dslicer/bin/SlicerApp-real] exit abnormally - Report the problem.

(full stacktrace)

    Warning: Ignoring XDG_SESSION_TYPE=wayland on Gnome. Use             
    QT_QPA_PLATFORM=wayland to run on Wayland anyway.
    Switch to module:  "Welcome"
    Switch to module:  "INHSTools"
    "Table" Reader has successfully read the file 
    "/home/megbalk/Documents/Slicer/iDigBioImagesNeeded.csv" "[0.02s]"
    setViewLabel should be called before setViewNode !
    setViewLabel should be called before setViewNode !
    setViewLabel should be called before setViewNode !
    setViewLabel should be called before setViewNode !
    setViewLabel should be called before setViewNode !
    setViewLabel should be called before setViewNode !
    <b>	Download failed: <urlopen error [Errno 110] Connection timed out></b>
    <b>Download failed (attempt 1 of 3)...</b>
    <b>	Download failed: <urlopen error [Errno 110] Connection timed out></b>
    <b>Download failed (attempt 2 of 3)...</b>
    error: [/opt/3dslicer/bin/SlicerApp-real] exit abnormally - Report the problem.

This happens when building from source, downloading the binary from AUR and downloading package from archlinuxrepocn.

uname -r -> 5.12.12-arch1-1

Any help would be greatly appreciated!

2

@megbalk
I suspect iDigBioImagesNeeded.csv is not in the format/order that this module expects and is probably not pulling the right URL from the table. Alternatively, you are behind a corporate firewall and trying to download https:// links and encountering an issue similar to this.

In any event this is not a general purpose module and the issues are better discussed on our project slack channel.