Hello,
I get an error message when trying to run total segmentator on the latest build.
Here is the error message I get
Traceback (most recent call last):
File "C:\Users\matte\AppData\Local\slicer.org\Slicer 5.7.0-2024-06-03\bin\Python\slicer\util.py", line 3295, in tryWithErrorDisplay
yield
File "C:/Users/matte/AppData/Local/slicer.org/Slicer 5.7.0-2024-06-03/slicer.org/Extensions-32891/TotalSegmentator/lib/Slicer-5.7/qt-scripted-modules/TotalSegmentator.py", line 298, in onApplyButton
self.logic.process(self.ui.inputVolumeSelector.currentNode(), self.ui.outputSegmentationSelector.currentNode(),
File "C:/Users/matte/AppData/Local/slicer.org/Slicer 5.7.0-2024-06-03/slicer.org/Extensions-32891/TotalSegmentator/lib/Slicer-5.7/qt-scripted-modules/TotalSegmentator.py", line 965, in process
self.processVolume(inputFile, inputVolume,
File "C:/Users/matte/AppData/Local/slicer.org/Slicer 5.7.0-2024-06-03/slicer.org/Extensions-32891/TotalSegmentator/lib/Slicer-5.7/qt-scripted-modules/TotalSegmentator.py", line 1039, in processVolume
self.logProcessOutput(proc)
File "C:/Users/matte/AppData/Local/slicer.org/Slicer 5.7.0-2024-06-03/slicer.org/Extensions-32891/TotalSegmentator/lib/Slicer-5.7/qt-scripted-modules/TotalSegmentator.py", line 811, in logProcessOutput
raise CalledProcessError(retcode, proc.args, output=proc.stdout, stderr=proc.stderr)
subprocess.CalledProcessError: Command '['C:/Users/matte/AppData/Local/slicer.org/Slicer 5.7.0-2024-06-03/bin/../bin\\PythonSlicer.EXE', 'C:\\Users\\matte\\AppData\\Local\\slicer.org\\Slicer 5.7.0-2024-06-03\\lib\\Python\\Scripts\\TotalSegmentator.exe', '-i', 'C:/Users/matte/AppData/Local/Temp/Slicer/__SlicerTemp__2024-06-05_16+55+30.623/total-segmentator-input.nii', '-o', 'C:/Users/matte/AppData/Local/Temp/Slicer/__SlicerTemp__2024-06-05_16+55+30.623/segmentation', '--ml', '--task', 'total', '--fast']' returned non-zero exit status 1.
I can’t run TotalSegmentator on the sample data
Contrary to most of the time, no error message shows up in the box
