I am trying to limit the computation of the DTI data to a masked region (created using the segment editor) within the volume (in this case a human disc). For reference, I am trying to remove the green regions around the disc.
Andras hi, could ask for your help with the first issue? I hope to present next week, and it would be very helpful to be able to segment out all the data outside the disc segmentation. I think there used to be an option to use the segment label to restrict the region of DTI reconstruction. However, I cannot find a way to do so (only option is brain label?). Happy to share the slicer file. R
Ron N Alkalay
Dept of Orthopedic Surgery, Harvard Medical School
Center for Advanced
Deaconess Medical Center
1 Overland Street
Boston, MA, 02215