Mice CT data (dicom file)

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1

Dear all,

I just wonder where I can find some CT images (micro-CT) for mice/rats to practice.
Could you please share some with me if you have?

ps: I develop a code for autonomous segmentation of mice/rat organs.

Kind Regards

2

Did you try MorphoSource (https://morphosource.org)?

3

Hi Murat,

Thanks for the repository source you have shared.

I have already requested some downloads at this website, I am still waiting for the owners’ response. It is so slow to get some image series from there. I was actually looking for some researchers (in this platform) to share some micro-CTs or give me some other idea about where I can find some quickly. In the worst case scnario, I will be waiting for the owners’ reply at (https://morphosource.org).

Anyway, thanks for the info!

4

Scientific data (nature) is also a good open access Journal to find data sets:
e.g.
https://www.nature.com/articles/sdata2018294
and the link to the repository of the µCT data. The data is in the Analyze file format (not dicom but Slicer can open it)

5

Hi Steffen,

It has worked well. Thanks for the information. People on (https://morphosource.org) also replied. It just took couple of days.

Thanks a lot.

Best