Hello Slicer wizards, I’ve been trying for the past weeks to segement brain arteries using Slicer. I’ve already seen a few topics on the discussin forum about this topic, but I still haven’t been successful reconstructing it. Things I have tried so far: Adjusting the thresholds value in the segm…

[image] Deyline: After filtering the vessels, I’m still left with a lot of non-interest entities, such as bones and tissues. This is expected. However, as described in the segmentation recipe linked above, if the suppressed bones and structures are small floating pieces and the vessel tree fo…

Problems when segmenting blood vessels using VMTK (threshold)

Support

lassoan (Andras Lasso) September 23, 2019, 2:45pm 2

Have you tried the “Vessel Segmentation By Subtraction” segmentation recipe?

Refine brain vessel segmentation

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Problems when segmenting blood vessels using VMTK (threshold)

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