Hello Slicer wizards, I’ve been trying for the past weeks to segement brain arteries using Slicer. I’ve already seen a few topics on the discussin forum about this topic, but I still haven’t been successful reconstructing it. Things I have tried so far: Adjusting the thresholds value in the segm…

[image] Deyline: After filtering the vessels, I’m still left with a lot of non-interest entities, such as bones and tissues. This is expected. However, as described in the segmentation recipe linked above, if the suppressed bones and structures are small floating pieces and the vessel tree fo…

Problems when segmenting blood vessels using VMTK (threshold)

Support

lassoan (Andras Lasso) September 23, 2019, 2:45pm 2

Have you tried the “Vessel Segmentation By Subtraction” segmentation recipe?

Refine brain vessel segmentation

Topic		Replies	Views
Can anyone help me with extraction of arteries from CT angiography of brain? Support	1	1061	August 10, 2019
How to segment blood vessels from bones? Support segmentation , extensions-manager	9	2883	November 23, 2018
Advice for (Semi-) Automated Segmentation of Neurovasculature Support segmentation , brain , vmtk , vessels	1	606	March 16, 2022
VMTK extension for PCA Support vmtk	1	362	October 23, 2018
Tips to circumvent not having pre-contrast injection images for the purpose of bone subtraction VMTK	1	448	May 13, 2021

Problems when segmenting blood vessels using VMTK (threshold)

Related topics