I would like to transform and resample my CT volume so that a user-defined plane becomes one of the orthogonal slices. I used to do this in AVIZO by defining points, best-fitting a plane to those points and then resampling the image volume with the plane as a reference object. How can I go about doi…

You can use this code snippet to set up a markup ROI node from plane node and use this ROI to resample the volume. The code snippet extracts a single slice but it can be easily modified to extract more slices by modifying the extents (last two numbers in imageData.SetExtent(...)).

Resample image volume along user-defined plane

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pieper (Steve Pieper (Isomics, Inc.)) July 5, 2024, 4:32pm 2

See discussion here: Non Orthogonal reslice - #2 by pieper

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Resample image volume along user-defined plane

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