Dear wonderful Slicer community-
Can anyone give me some advise to speed my learning curve. I have a 80 ADC maps from babies and want to manually create a new volume that contains my drawn annotation of viably abnormal voxels.
Step 1: Open the ADC volume in Slicer
Step 2: ???
Many thanks!
Randy
Operating system: MacBook Pro running Sierra
Slicer version: 4.8.1
Expected behavior: unsure what to expect but guess it will be awesome
Actual behavior: TSTT- still downloading
Hey, welcome to the forum @RandyGollub ! (For those who don’t know her personally, Randy is a real neuroscience pro and a friend so I’ll also help her get started but advice from the forum is more than welcome).
To answer your question:
Step 1. drag and drop file on slicer to load
Step 2. open segment editor, add a segment and start drawing
Step 3. save as a nii file
(There are for sure some non-obvious substeps but that’s the basic idea).
Maybe start by watching this video:
https://www.slicer.org/wiki/Documentation/Nightly/Training#Segmentation_for_3D_printing
In terms of tutorials, Sonia’s “General Introduction” slides should be good for reference:
https://www.slicer.org/wiki/Documentation/4.8/Training#General_Introduction
Also you’ll want to look through the Segment Editor documentation:
http://slicer.readthedocs.io/en/latest/user_guide/module_segmenteditor.html